nsv429628
- Organism: Homo sapiens
- Study:nstd11 (Walter et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:88,965
- Publication(s):Walter et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 326 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 326 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 90 SVs from 11 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv429628 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 73,936,854 | 74,025,818 |
| nsv429628 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 74,229,195 | 74,318,159 |
| nsv429628 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000015.8 | Chr15 | 72,016,248 | 72,105,212 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|---|
| nssv459414 | copy number gain | SNP array | SNP genotyping analysis | Leukemia, Myeloid, Acute | not provided | Submitter |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv459414 | Remapped | Perfect | NC_000015.10:g.(?_ 73936854)_(7402581 8_?)dup | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 73,936,854 | 74,025,818 |
| nssv459414 | Remapped | Perfect | NC_000015.9:g.(?_7 4229195)_(74318159 _?)dup | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 74,229,195 | 74,318,159 |
| nssv459414 | Submitted genomic | NC_000015.8:g.(?_7 2016248)_(72105212 _?)dup | NCBI36 (hg18) | NC_000015.8 | Chr15 | 72,016,248 | 72,105,212 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|---|
| nssv459414 | NCBI36: NC_000015.8:g.(?_72016248)_(72105212_?)dup | copy number gain | somatic | Leukemia, Myeloid, Acute | not provided | Submitter |