nsv429999
- Organism: Homo sapiens
- Study:nstd12 (Marshall et al. 2008)
- Variant Type:copy number variation
- Method Type:Merging, SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:287,035
- Publication(s):Marshall et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 826 SVs from 71 studies. See in: genome view
Overlapping variant regions from other studies: 832 SVs from 71 studies. See in: genome view
Overlapping variant regions from other studies: 63 SVs from 8 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv429999 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 16,102,068 | 16,389,102 |
| nsv429999 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 16,102,066 | 16,389,100 |
| nsv429999 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000009.9 | Chr9 | 16,092,066 | 16,379,100 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv560564 | copy number gain | 63583L | Merging, SNP array | Merging, SNP genotyping analysis | 13 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv560564 | Remapped | Perfect | NC_000009.12:g.(?_ 16102068)_(1638910 2_?)dup | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 16,102,068 | 16,389,102 |
| nssv560564 | Remapped | Perfect | NC_000009.11:g.(?_ 16102066)_(1638910 0_?)dup | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 16,102,066 | 16,389,100 |
| nssv560564 | Submitted genomic | NC_000009.9:g.(?_1 6092066)_(16379100 _?)dup | NCBI35 (hg17) | NC_000009.9 | Chr9 | 16,092,066 | 16,379,100 |