nsv430115
- Organism: Homo sapiens
- Study:nstd12 (Marshall et al. 2008)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:166,001
- Publication(s):Marshall et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1473 SVs from 102 studies. See in: genome view
Overlapping variant regions from other studies: 1473 SVs from 102 studies. See in: genome view
Overlapping variant regions from other studies: 71 SVs from 11 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv430115 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 135,260,209 | 135,426,209 |
| nsv430115 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 138,152,055 | 138,318,055 |
| nsv430115 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000009.9 | Chr9 | 135,378,000 | 135,544,000 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv560809 | copy number gain | 60662L | SNP array | SNP genotyping analysis | 5 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv560809 | Remapped | Perfect | NC_000009.12:g.(?_ 135260209)_(135426 209_?)dup | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 135,260,209 | 135,426,209 |
| nssv560809 | Remapped | Perfect | NC_000009.11:g.(?_ 138152055)_(138318 055_?)dup | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 138,152,055 | 138,318,055 |
| nssv560809 | Submitted genomic | NC_000009.9:g.(?_1 35378000)_(1355440 00_?)dup | NCBI35 (hg17) | NC_000009.9 | Chr9 | 135,378,000 | 135,544,000 |