nsv432630
- Organism: Homo sapiens
- Study:nstd12 (Marshall et al. 2008)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:254,001
- Publication(s):Marshall et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 869 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 869 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 74 SVs from 7 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv432630 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 134,003,240 | 134,257,240 |
nsv432630 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 134,924,395 | 135,178,395 |
nsv432630 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000004.9 | Chr4 | 135,282,000 | 135,536,000 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv558923 | copy number loss | 52191 | SNP array | SNP genotyping analysis | nssv565930 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv558923 | Remapped | Perfect | NC_000004.12:g.(?_ 134003240)_(134257 240_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 134,003,240 | 134,257,240 |
nssv558923 | Remapped | Perfect | NC_000004.11:g.(?_ 134924395)_(135178 395_?)del | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 134,924,395 | 135,178,395 |
nssv558923 | Submitted genomic | NC_000004.9:g.(?_1 35282000)_(1355360 00_?)del | NCBI35 (hg17) | NC_000004.9 | Chr4 | 135,282,000 | 135,536,000 |