nsv432791
- Organism: Homo sapiens
- Study:nstd12 (Marshall et al. 2008)
- Variant Type:copy number variation
- Method Type:Merging, SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:173,554
- Publication(s):Marshall et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 847 SVs from 81 studies. See in: genome view
Overlapping variant regions from other studies: 847 SVs from 81 studies. See in: genome view
Overlapping variant regions from other studies: 34 SVs from 6 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv432791 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 100,245,820 | 100,419,373 |
| nsv432791 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000005.9 | Chr5 | 99,581,524 | 99,755,077 |
| nsv432791 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000005.8 | Chr5 | 99,609,423 | 99,782,976 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv559318 | copy number loss | 44307 | Merging, SNP array | Merging, SNP genotyping analysis | 8 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv559318 | Remapped | Perfect | NC_000005.10:g.(?_ 100245820)_(100419 373_?)del | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 100,245,820 | 100,419,373 |
| nssv559318 | Remapped | Perfect | NC_000005.9:g.(?_9 9581524)_(99755077 _?)del | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 99,581,524 | 99,755,077 |
| nssv559318 | Submitted genomic | NC_000005.8:g.(?_9 9609423)_(99782976 _?)del | NCBI35 (hg17) | NC_000005.8 | Chr5 | 99,609,423 | 99,782,976 |