nsv432971
- Organism: Homo sapiens
- Study:nstd12 (Marshall et al. 2008)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:373,922
- Publication(s):Marshall et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1869 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 1869 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 81 SVs from 9 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv432971 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 161,652,298 | 162,026,219 |
| nsv432971 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 162,073,330 | 162,447,251 |
| nsv432971 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000006.9 | Chr6 | 162,043,741 | 162,417,662 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv559703 | copy number loss | 75415 | SNP array | SNP genotyping analysis | 7 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv559703 | Remapped | Perfect | NC_000006.12:g.(?_ 161652298)_(162026 219_?)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 161,652,298 | 162,026,219 |
| nssv559703 | Remapped | Perfect | NC_000006.11:g.(?_ 162073330)_(162447 251_?)del | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 162,073,330 | 162,447,251 |
| nssv559703 | Submitted genomic | NC_000006.9:g.(?_1 62043741)_(1624176 62_?)del | NCBI35 (hg17) | NC_000006.9 | Chr6 | 162,043,741 | 162,417,662 |