Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv433264

Organism: Homo sapiens

Study:nstd14 (Cooper et al. 2008)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI35 (hg17)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:65,087

Publication(s):Cooper et al. 2008

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 794 SVs from 89 studies. See in: genome view

Remapped(Score: Perfect):49,691,277-49,756,348

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv433264	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	49,691,277	49,756,348
nsv433264	Remapped	Good	GRCh38.p12	PATCHES	Second Pass	NW_019805495.1	Chr11\|NW_0 19805495.1	155,411	220,497
nsv433264	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	49,712,829	49,777,900
nsv433264	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000011.8	Chr11	49,669,405	49,734,476

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
nssv463145	copy number loss	NA12156	SNP array	SNP genotyping analysis	Hemizygous	38

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv463145	Remapped	Good	NW_019805495.1:g.( ?_155411)_(220497_ ?)del	GRCh38.p12	Second Pass	NW_019805495.1	Chr11\|NW_0 19805495.1	155,411	220,497
nssv463145	Remapped	Perfect	NC_000011.10:g.(?_ 49691277)_(4975634 8_?)del	GRCh38.p12	First Pass	NC_000011.10	Chr11	49,691,277	49,756,348
nssv463145	Remapped	Perfect	NC_000011.9:g.(?_4 9712829)_(49777900 _?)del	GRCh37.p13	First Pass	NC_000011.9	Chr11	49,712,829	49,777,900
nssv463145	Submitted genomic		NC_000011.8:g.(?_4 9669405)_(49734476 _?)del	NCBI35 (hg17)		NC_000011.8	Chr11	49,669,405	49,734,476

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI