nsv433382
- Organism: Homo sapiens
- Study:nstd14 (Cooper et al. 2008)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:23,268
- Publication(s):Cooper et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 689 SVs from 82 studies. See in: genome view
Overlapping variant regions from other studies: 476 SVs from 64 studies. See in: genome view
Overlapping variant regions from other studies: 478 SVs from 64 studies. See in: genome view
Overlapping variant regions from other studies: 740 SVs from 84 studies. See in: genome view
Overlapping variant regions from other studies: 48 SVs from 10 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv433382 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 45,653 | 68,920 |
| nsv433382 | Remapped | Perfect | GRCh38.p12 | ALT_REF_LOCI_1 | Second Pass | NT_187558.1 | Chr7|NT_18 7558.1 | 1,752 | 25,019 |
| nsv433382 | Remapped | Perfect | GRCh38.p12 | ALT_REF_LOCI_2 | Second Pass | NT_187653.1 | Chr7|NT_18 7653.1 | 37,974 | 61,241 |
| nsv433382 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 45,653 | 68,920 |
| nsv433382 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000007.11 | Chr7 | 140,736 | 164,003 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv463263 | Remapped | Perfect | NT_187558.1:g.(?_1 752)_(25019_?)dup | GRCh38.p12 | Second Pass | NT_187558.1 | Chr7|NT_18 7558.1 | 1,752 | 25,019 |
| nssv463263 | Remapped | Perfect | NT_187653.1:g.(?_3 7974)_(61241_?)dup | GRCh38.p12 | Second Pass | NT_187653.1 | Chr7|NT_18 7653.1 | 37,974 | 61,241 |
| nssv463263 | Remapped | Perfect | NC_000007.14:g.(?_ 45653)_(68920_?)du p | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 45,653 | 68,920 |
| nssv463263 | Remapped | Perfect | NC_000007.13:g.(?_ 45653)_(68920_?)du p | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 45,653 | 68,920 |
| nssv463263 | Submitted genomic | NC_000007.11:g.(?_ 140736)_(164003_?) dup | NCBI35 (hg17) | NC_000007.11 | Chr7 | 140,736 | 164,003 |