nsv433393
- Organism: Homo sapiens
- Study:nstd14 (Cooper et al. 2008)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:26,530
- Publication(s):Cooper et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1513 SVs from 87 studies. See in: genome view
Overlapping variant regions from other studies: 1294 SVs from 67 studies. See in: genome view
Overlapping variant regions from other studies: 1430 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 1015 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 387 SVs from 9 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv433393 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 142,060,998 | 142,087,527 |
nsv433393 | Remapped | Perfect | GRCh38.p12 | ALT_REF_LOCI_1 | Second Pass | NT_187562.1 | Chr7|NT_18 7562.1 | 22,878 | 49,407 |
nsv433393 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | Second Pass | NC_000007.13 | Chr7 | 141,760,798 | 141,787,327 |
nsv433393 | Remapped | Perfect | GRCh37.p13 | PATCHES | First Pass | NW_003571040.1 | Chr7|NW_00 3571040.1 | 202,949 | 229,478 |
nsv433393 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000007.11 | Chr7 | 141,213,982 | 141,240,511 |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv463274 | Remapped | Perfect | NT_187562.1:g.(?_2 2878)_(49407_?)dup | GRCh38.p12 | Second Pass | NT_187562.1 | Chr7|NT_18 7562.1 | 22,878 | 49,407 |
nssv463274 | Remapped | Perfect | NC_000007.14:g.(?_ 142060998)_(142087 527_?)dup | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 142,060,998 | 142,087,527 |
nssv463274 | Remapped | Perfect | NW_003571040.1:g.( ?_202949)_(229478_ ?)dup | GRCh37.p13 | First Pass | NW_003571040.1 | Chr7|NW_00 3571040.1 | 202,949 | 229,478 |
nssv463274 | Remapped | Perfect | NC_000007.13:g.(?_ 141760798)_(141787 327_?)dup | GRCh37.p13 | Second Pass | NC_000007.13 | Chr7 | 141,760,798 | 141,787,327 |
nssv463274 | Submitted genomic | NC_000007.11:g.(?_ 141213982)_(141240 511_?)dup | NCBI35 (hg17) | NC_000007.11 | Chr7 | 141,213,982 | 141,240,511 |