nsv436010
- Organism: Homo sapiens
- Study:nstd16 (Korbel et al. 2007)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:7,179
- Description:Mated-Insertion
- Publication(s):Korbel et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 43 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 170 SVs from 43 studies. See in: genome view
Overlapping variant regions from other studies: 58 SVs from 14 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nsv436010 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NT_187513.1 | Unplaced|N T_187513.1 | 9,493 | 16,671 |
nsv436010 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 142,790,515 | 142,797,693 |
nsv436010 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000001.9 | Chr1 | 141,732,038 | 141,739,216 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv466495 | insertion | SAMN00000376 | Sequencing | Paired-end mapping | 468 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nssv466495 | Remapped | Perfect | NT_187513.1:g.(949 3_?)_(?_16671)ins? | GRCh38.p12 | First Pass | NT_187513.1 | Unplaced|N T_187513.1 | 9,493 | 16,671 |
nssv466495 | Remapped | Perfect | NC_000001.10:g.(14 2790515_?)_(?_1427 97693)ins? | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 142,790,515 | 142,797,693 |
nssv466495 | Submitted genomic | NC_000001.9:g.(141 732038_?)_(?_14173 9216)ins(0_?) | NCBI36 (hg18) | NC_000001.9 | Chr1 | 141,732,038 | 141,739,216 |