nsv436127
- Organism: Homo sapiens
- Study:nstd16 (Korbel et al. 2007)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:22,964
- Publication(s):Korbel et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 356 SVs from 69 studies. See in: genome view
Overlapping variant regions from other studies: 356 SVs from 69 studies. See in: genome view
Overlapping variant regions from other studies: 133 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv436127 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 1,892,891 | 1,915,854 |
| nsv436127 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 1,914,121 | 1,937,084 |
| nsv436127 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 1,870,697 | 1,893,660 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv466630 | deletion | SAMN00001583 | Sequencing | Paired-end mapping | 822 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv466630 | Remapped | Perfect | NC_000011.10:g.(18 92891_?)_(?_191585 4)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 1,892,891 | 1,915,854 |
| nssv466630 | Remapped | Perfect | NC_000011.9:g.(191 4121_?)_(?_1937084 )del | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 1,914,121 | 1,937,084 |
| nssv466630 | Submitted genomic | NC_000011.8:g.(187 0697_?)_(?_1893660 )del | NCBI36 (hg18) | NC_000011.8 | Chr11 | 1,870,697 | 1,893,660 |