nsv436182
- Organism: Homo sapiens
- Study:nstd16 (Korbel et al. 2007)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:15,467
- Publication(s):Korbel et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 145 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 145 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 36 SVs from 13 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv436182 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 57,666,589 | 57,682,055 |
| nsv436182 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000014.8 | Chr14 | 58,133,307 | 58,148,773 |
| nsv436182 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000014.7 | Chr14 | 57,203,060 | 57,218,526 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv466764 | deletion | SAMN00001583 | Sequencing | Paired-end mapping | 822 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv466764 | Remapped | Perfect | NC_000014.9:g.(576 66589_?)_(?_576820 55)del | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 57,666,589 | 57,682,055 |
| nssv466764 | Remapped | Perfect | NC_000014.8:g.(581 33307_?)_(?_581487 73)del | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 58,133,307 | 58,148,773 |
| nssv466764 | Submitted genomic | NC_000014.7:g.(572 03060_?)_(?_572185 26)del | NCBI36 (hg18) | NC_000014.7 | Chr14 | 57,203,060 | 57,218,526 |