nsv436484
- Organism: Homo sapiens
- Study:nstd16 (Korbel et al. 2007)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:21,238
- Publication(s):Korbel et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 439 SVs from 69 studies. See in: genome view
Overlapping variant regions from other studies: 439 SVs from 69 studies. See in: genome view
Overlapping variant regions from other studies: 250 SVs from 25 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nsv436484 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 150,823,514 | 150,844,751 |
nsv436484 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000005.9 | Chr5 | 150,203,076 | 150,224,313 |
nsv436484 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000005.8 | Chr5 | 150,183,269 | 150,204,506 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv466248 | deletion | SAMN00001583 | Sequencing | Paired-end mapping | 822 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nssv466248 | Remapped | Perfect | NC_000005.10:g.(15 0823514_?)_(?_1508 44751)del | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 150,823,514 | 150,844,751 |
nssv466248 | Remapped | Perfect | NC_000005.9:g.(150 203076_?)_(?_15022 4313)del | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 150,203,076 | 150,224,313 |
nssv466248 | Submitted genomic | NC_000005.8:g.(150 183269_?)_(?_15020 4506)del | NCBI36 (hg18) | NC_000005.8 | Chr5 | 150,183,269 | 150,204,506 |