nsv4365574

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:29
Validation:Not tested
Clinical Assertions: No
Region Size:82,552

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 798 SVs from 96 studies. See in: genome view

Remapped(Score: Perfect):38,256,331-38,338,882

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4365574	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nsv4365574	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	38,295,932	38,378,483

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15632070	copy number gain	10-0009-002	SNP array	Genotyping	21
nssv15634636	copy number gain	12-4310-002	SNP array	Genotyping	21
nssv15637191	copy number gain	12-4855-003	SNP array	Genotyping	27
nssv15648820	copy number gain	2-1315-003	SNP array	Genotyping	24
nssv15652763	copy number gain	2-1529-002	SNP array	Genotyping	13
nssv15672544	copy number gain	9-0009-002	SNP array	Genotyping	23
nssv15673667	copy number gain	206776	SNP array	Genotyping	21
nssv15675697	copy number gain	206766	SNP array	Genotyping	30
nssv15680309	copy number gain	225332	SNP array	Genotyping	20
nssv15682472	copy number gain	OCD1145-8961073	SNP array	Genotyping	25
nssv15683370	copy number gain	OCD106-1608	SNP array	Genotyping	19
nssv15683528	copy number gain	OCD125-896992	SNP array	Genotyping	24
nssv15684192	copy number gain	OCD1112-896023	SNP array	Genotyping	15
nssv15689471	copy number gain	OCD105-1596	SNP array	Genotyping	19
nssv15690257	copy number gain	OCD132-8961113	SNP array	Genotyping	18
nssv15690963	copy number gain	OCD178-YS-1806	SNP array	Genotyping	19
nssv15691149	copy number gain	OCD27-S_896533	SNP array	Genotyping	23
nssv15691311	copy number gain	OCD40-S_0625-1428-3	SNP array	Genotyping	25
nssv15692041	copy number gain	OCD60-0625-4081-2	SNP array	Genotyping	27
nssv15692131	copy number gain	OCD64-BF-1422	SNP array	Genotyping	17
nssv15692230	copy number gain	OCD67-896282	SNP array	Genotyping	14
nssv15692487	copy number gain	OCD62-MI-1457	SNP array	Genotyping	13
nssv15692681	copy number gain	OCD53-S_0625-8346-2	SNP array	Genotyping	26
nssv15695243	copy number gain	158188	SNP array	Genotyping	22
nssv15697152	copy number gain	178828	SNP array	Genotyping	18
nssv15698458	copy number gain	213678	SNP array	Genotyping	18
nssv15698566	copy number gain	222720	SNP array	Genotyping	24
nssv15699753	copy number gain	226265	SNP array	Genotyping	20
nssv15699985	copy number gain	180694	SNP array	Genotyping	19

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15632070	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15634636	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15637191	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15648820	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15652763	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15672544	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15673667	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15675697	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15680309	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15682472	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15683370	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15683528	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15684192	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15689471	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15690257	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15690963	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15691149	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15691311	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15692041	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15692131	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15692230	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15692487	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15692681	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15695243	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15697152	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15698458	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15698566	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15699753	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15699985	Remapped	Perfect	NC_000007.14:g.(?_ 38256331)_(3833888 2_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,256,331	38,338,882
nssv15632070	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15634636	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15637191	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15648820	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15652763	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15672544	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15673667	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15675697	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15680309	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15682472	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15683370	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15683528	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15684192	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15689471	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15690257	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15690963	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15691149	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15691311	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15692041	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15692131	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15692230	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15692487	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15692681	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15695243	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15697152	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15698458	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15698566	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15699753	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483
nssv15699985	Submitted genomic		NC_000007.13:g.(?_ 38295932)_(3837848 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,932	38,378,483

dbVar

Database of genomic structural variation

nsv4365574

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant