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dbVar

Database of genomic structural variation

nsv4365775

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:24,014

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 579 SVs from 76 studies. See in: genome view

Remapped(Score: Perfect):2,126,775-2,150,788

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4365775	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000012.12	Chr12	2,126,775	2,150,788
nsv4365775	Remapped	Perfect	GRCh38.p12	PATCHES	Second Pass	NW_018654718.1	Chr12\|NW_0 18654718.1	468,919	492,932
nsv4365775	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000012.11	Chr12	2,235,941	2,259,954

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15623417	copy number variation	1-0236-002	SNP array	Genotyping	23
nssv15686599	copy number variation	OCD151-SH-1297(190321)	SNP array	Genotyping	16

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15623417	Remapped	Perfect	GRCh38.p12	Second Pass	NW_018654718.1	Chr12\|NW_0 18654718.1	468,919	492,932
nssv15686599	Remapped	Perfect	GRCh38.p12	Second Pass	NW_018654718.1	Chr12\|NW_0 18654718.1	468,919	492,932
nssv15623417	Remapped	Perfect	GRCh38.p12	First Pass	NC_000012.12	Chr12	2,126,775	2,150,788
nssv15686599	Remapped	Perfect	GRCh38.p12	First Pass	NC_000012.12	Chr12	2,126,775	2,150,788
nssv15623417	Submitted genomic		GRCh37 (hg19)		NC_000012.11	Chr12	2,235,941	2,259,954
nssv15686599	Submitted genomic		GRCh37 (hg19)		NC_000012.11	Chr12	2,235,941	2,259,954

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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