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dbVar

Database of genomic structural variation

nsv4366258

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:213,820

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1625 SVs from 94 studies. See in: genome view

Remapped(Score: Perfect):6,890,138-7,103,957

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4366258	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000019.10	Chr19	6,890,138	7,103,957
nsv4366258	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000019.9	Chr19	6,890,149	7,103,968

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15675037	copy number gain	209351	SNP array	Genotyping	35
nssv15686013	copy number gain	OCD176-8961181	SNP array	Genotyping	15

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15675037	Remapped	Perfect	NC_000019.10:g.(?_ 6890138)_(7103957_ ?)dup	GRCh38.p12	First Pass	NC_000019.10	Chr19	6,890,138	7,103,957
nssv15686013	Remapped	Perfect	NC_000019.10:g.(?_ 6890138)_(7103957_ ?)dup	GRCh38.p12	First Pass	NC_000019.10	Chr19	6,890,138	7,103,957
nssv15675037	Submitted genomic		NC_000019.9:g.(?_6 890149)_(7103968_? )dup	GRCh37 (hg19)		NC_000019.9	Chr19	6,890,149	7,103,968
nssv15686013	Submitted genomic		NC_000019.9:g.(?_6 890149)_(7103968_? )dup	GRCh37 (hg19)		NC_000019.9	Chr19	6,890,149	7,103,968

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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