nsv4366770

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:47
Validation:Not tested
Clinical Assertions: No
Region Size:25,870

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 703 SVs from 75 studies. See in: genome view

Remapped(Score: Perfect):55,762,650-55,788,519

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4366770	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nsv4366770	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	55,796,562	55,822,431

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15612915	copy number loss	1-0691-003	SNP array	Genotyping	26
nssv15613274	copy number loss	1-0121-001	SNP array	Genotyping	28
nssv15613365	copy number loss	1-0701-003	SNP array	Genotyping	20
nssv15622969	copy number loss	1-0236-003	SNP array	Genotyping	29
nssv15623850	copy number loss	1-0248-003	SNP array	Genotyping	22
nssv15624382	copy number loss	1-0286-003	SNP array	Genotyping	18
nssv15638634	copy number loss	14-0007-003	SNP array	Genotyping	28
nssv15640899	copy number loss	14-0318-001	SNP array	Genotyping	25
nssv15643332	copy number loss	14-0364-003	SNP array	Genotyping	18
nssv15649659	copy number loss	2-1325-003	SNP array	Genotyping	20
nssv15650264	copy number loss	2-1336-004	SNP array	Genotyping	18
nssv15651318	copy number loss	2-1371-001	SNP array	Genotyping	18
nssv15653562	copy number loss	2-1595-001	SNP array	Genotyping	24
nssv15664252	copy number loss	7-0052-003	SNP array	Genotyping	33
nssv15665357	copy number loss	7-0032-003	SNP array	Genotyping	25
nssv15671694	copy number loss	9-0004-003	SNP array	Genotyping	22
nssv15671923	copy number loss	9-0020-002	SNP array	Genotyping	21
nssv15674461	copy number loss	9-0037-002	SNP array	Genotyping	23
nssv15677606	copy number loss	215806	SNP array	Genotyping	23
nssv15678287	copy number loss	168475	SNP array	Genotyping	22
nssv15679388	copy number loss	219842	SNP array	Genotyping	19
nssv15682583	copy number loss	OCD115-S_1689	SNP array	Genotyping	28
nssv15682694	copy number loss	OCD113-1681	SNP array	Genotyping	19
nssv15682903	copy number loss	OCD12-S_896223	SNP array	Genotyping	21
nssv15683469	copy number loss	OCD124-B_188609	SNP array	Genotyping	22
nssv15683577	copy number loss	OCD130-8961052	SNP array	Genotyping	20
nssv15685304	copy number loss	OCD117-B_1699	SNP array	Genotyping	29
nssv15687050	copy number loss	OCD39-S_0625-1152-2	SNP array	Genotyping	27
nssv15687192	copy number loss	OCD33-S_896593	SNP array	Genotyping	25
nssv15687364	copy number loss	OCD47-S_0625-5986-3	SNP array	Genotyping	21
nssv15689864	copy number loss	OCD1152-S_HAM563	SNP array	Genotyping	22
nssv15689933	copy number loss	OCD116-B_1695	SNP array	Genotyping	20
nssv15690866	copy number loss	OCD170-TJ-1809	SNP array	Genotyping	25
nssv15691022	copy number loss	OCD23-S_896432	SNP array	Genotyping	17
nssv15691287	copy number loss	OCD3-S_896082	SNP array	Genotyping	22
nssv15692105	copy number loss	OCD61-PC-1273	SNP array	Genotyping	26
nssv15692282	copy number loss	OCD68-896042	SNP array	Genotyping	31
nssv15693036	copy number loss	OCD81-896771	SNP array	Genotyping	20
nssv15693623	copy number loss	OCD95-1053	SNP array	Genotyping	20
nssv15694186	copy number loss	OCD81-896773	SNP array	Genotyping	28
nssv15695123	copy number loss	142112	SNP array	Genotyping	21
nssv15695520	copy number loss	170160	SNP array	Genotyping	17
nssv15696045	copy number loss	153030	SNP array	Genotyping	19
nssv15697516	copy number loss	168089	SNP array	Genotyping	18
nssv15697531	copy number loss	241423	SNP array	Genotyping	17
nssv15700592	copy number loss	143389	SNP array	Genotyping	15
nssv15702844	copy number loss	200764	SNP array	Genotyping	21

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15612915	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15613274	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15613365	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15622969	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15623850	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15624382	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15638634	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15640899	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15643332	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15649659	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15650264	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15651318	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15653562	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15664252	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15665357	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15671694	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15671923	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15674461	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15677606	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15678287	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15679388	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15682583	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15682694	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15682903	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15683469	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15683577	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15685304	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15687050	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15687192	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15687364	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15689864	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15689933	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15690866	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15691022	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15691287	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15692105	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15692282	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15693036	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15693623	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15694186	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15695123	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15695520	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15696045	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15697516	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15697531	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15700592	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15702844	Remapped	Perfect	NC_000016.10:g.(?_ 55762650)_(5578851 9_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	55,762,650	55,788,519
nssv15612915	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15613274	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15613365	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15622969	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15623850	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15624382	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15638634	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15640899	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15643332	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15649659	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15650264	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15651318	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15653562	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15664252	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15665357	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15671694	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15671923	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15674461	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15677606	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15678287	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15679388	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15682583	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15682694	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15682903	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15683469	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15683577	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15685304	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15687050	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15687192	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15687364	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15689864	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15689933	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15690866	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15691022	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15691287	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15692105	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15692282	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15693036	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15693623	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15694186	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15695123	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15695520	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15696045	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15697516	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15697531	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15700592	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431
nssv15702844	Submitted genomic		NC_000016.9:g.(?_5 5796562)_(55822431 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	55,796,562	55,822,431

dbVar

Database of genomic structural variation

nsv4366770

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Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant