nsv4366809
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:7
- Validation:Not tested
- Clinical Assertions: No
- Region Size:44,521
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 378 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 378 SVs from 79 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4366809 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 59,042,992 | 59,087,512 |
nsv4366809 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 58,810,465 | 58,854,985 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv15626409 | copy number gain | 1-0051-006 | SNP array | Genotyping | 32 |
nssv15650358 | copy number gain | 2-1341-003 | SNP array | Genotyping | 25 |
nssv15658797 | copy number gain | 3-0610-000 | SNP array | Genotyping | 26 |
nssv15663675 | copy number gain | 5-1009-003 | SNP array | Genotyping | 22 |
nssv15665158 | copy number gain | 7-0057-003 | SNP array | Genotyping | 19 |
nssv15686139 | copy number gain | OCD2-B_LK-1286 | SNP array | Genotyping | 18 |
nssv15691297 | copy number gain | OCD4-S_896093 | SNP array | Genotyping | 26 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv15626409 | Remapped | Perfect | NC_000011.10:g.(?_ 59042992)_(5908751 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 59,042,992 | 59,087,512 |
nssv15650358 | Remapped | Perfect | NC_000011.10:g.(?_ 59042992)_(5908751 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 59,042,992 | 59,087,512 |
nssv15658797 | Remapped | Perfect | NC_000011.10:g.(?_ 59042992)_(5908751 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 59,042,992 | 59,087,512 |
nssv15663675 | Remapped | Perfect | NC_000011.10:g.(?_ 59042992)_(5908751 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 59,042,992 | 59,087,512 |
nssv15665158 | Remapped | Perfect | NC_000011.10:g.(?_ 59042992)_(5908751 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 59,042,992 | 59,087,512 |
nssv15686139 | Remapped | Perfect | NC_000011.10:g.(?_ 59042992)_(5908751 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 59,042,992 | 59,087,512 |
nssv15691297 | Remapped | Perfect | NC_000011.10:g.(?_ 59042992)_(5908751 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 59,042,992 | 59,087,512 |
nssv15626409 | Submitted genomic | NC_000011.9:g.(?_5 8810465)_(58854985 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 58,810,465 | 58,854,985 | ||
nssv15650358 | Submitted genomic | NC_000011.9:g.(?_5 8810465)_(58854985 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 58,810,465 | 58,854,985 | ||
nssv15658797 | Submitted genomic | NC_000011.9:g.(?_5 8810465)_(58854985 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 58,810,465 | 58,854,985 | ||
nssv15663675 | Submitted genomic | NC_000011.9:g.(?_5 8810465)_(58854985 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 58,810,465 | 58,854,985 | ||
nssv15665158 | Submitted genomic | NC_000011.9:g.(?_5 8810465)_(58854985 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 58,810,465 | 58,854,985 | ||
nssv15686139 | Submitted genomic | NC_000011.9:g.(?_5 8810465)_(58854985 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 58,810,465 | 58,854,985 | ||
nssv15691297 | Submitted genomic | NC_000011.9:g.(?_5 8810465)_(58854985 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 58,810,465 | 58,854,985 |