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dbVar

Database of genomic structural variation

nsv4366809

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:7
Validation:Not tested
Clinical Assertions: No
Region Size:44,521

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 378 SVs from 79 studies. See in: genome view

Remapped(Score: Perfect):59,042,992-59,087,512

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4366809	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	59,042,992	59,087,512
nsv4366809	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	58,810,465	58,854,985

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15626409	copy number gain	1-0051-006	SNP array	Genotyping	32
nssv15650358	copy number gain	2-1341-003	SNP array	Genotyping	25
nssv15658797	copy number gain	3-0610-000	SNP array	Genotyping	26
nssv15663675	copy number gain	5-1009-003	SNP array	Genotyping	22
nssv15665158	copy number gain	7-0057-003	SNP array	Genotyping	19
nssv15686139	copy number gain	OCD2-B_LK-1286	SNP array	Genotyping	18
nssv15691297	copy number gain	OCD4-S_896093	SNP array	Genotyping	26

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15626409	Remapped	Perfect	NC_000011.10:g.(?_ 59042992)_(5908751 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	59,042,992	59,087,512
nssv15650358	Remapped	Perfect	NC_000011.10:g.(?_ 59042992)_(5908751 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	59,042,992	59,087,512
nssv15658797	Remapped	Perfect	NC_000011.10:g.(?_ 59042992)_(5908751 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	59,042,992	59,087,512
nssv15663675	Remapped	Perfect	NC_000011.10:g.(?_ 59042992)_(5908751 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	59,042,992	59,087,512
nssv15665158	Remapped	Perfect	NC_000011.10:g.(?_ 59042992)_(5908751 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	59,042,992	59,087,512
nssv15686139	Remapped	Perfect	NC_000011.10:g.(?_ 59042992)_(5908751 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	59,042,992	59,087,512
nssv15691297	Remapped	Perfect	NC_000011.10:g.(?_ 59042992)_(5908751 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	59,042,992	59,087,512
nssv15626409	Submitted genomic		NC_000011.9:g.(?_5 8810465)_(58854985 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	58,810,465	58,854,985
nssv15650358	Submitted genomic		NC_000011.9:g.(?_5 8810465)_(58854985 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	58,810,465	58,854,985
nssv15658797	Submitted genomic		NC_000011.9:g.(?_5 8810465)_(58854985 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	58,810,465	58,854,985
nssv15663675	Submitted genomic		NC_000011.9:g.(?_5 8810465)_(58854985 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	58,810,465	58,854,985
nssv15665158	Submitted genomic		NC_000011.9:g.(?_5 8810465)_(58854985 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	58,810,465	58,854,985
nssv15686139	Submitted genomic		NC_000011.9:g.(?_5 8810465)_(58854985 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	58,810,465	58,854,985
nssv15691297	Submitted genomic		NC_000011.9:g.(?_5 8810465)_(58854985 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	58,810,465	58,854,985

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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