nsv4366922

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:20
Validation:Not tested
Clinical Assertions: No
Region Size:45,201

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1262 SVs from 86 studies. See in: genome view

Remapped(Score: Perfect):257,061-302,261

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4366922	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	257,061	302,261
nsv4366922	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	257,061	302,261

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15613881	copy number loss	1-0707-005	SNP array	Genotyping	21
nssv15614429	copy number gain	1-0761-005	SNP array	Genotyping	24
nssv15627695	copy number loss	1-0533-003	SNP array	Genotyping	17
nssv15632486	copy number loss	10-0007-002	SNP array	Genotyping	26
nssv15640366	copy number gain	14-0152-001	SNP array	Genotyping	22
nssv15640642	copy number loss	14-0349-003	SNP array	Genotyping	20
nssv15642700	copy number loss	14-0356-004	SNP array	Genotyping	24
nssv15647401	copy number gain	2-1239-003	SNP array	Genotyping	15
nssv15647683	copy number gain	2-0318-002	SNP array	Genotyping	21
nssv15647943	copy number gain	2-1314-003	SNP array	Genotyping	18
nssv15649243	copy number gain	2-1266-002	SNP array	Genotyping	24
nssv15650011	copy number loss	2-1425-001	SNP array	Genotyping	27
nssv15650131	copy number gain	2-1295-002	SNP array	Genotyping	16
nssv15650626	copy number loss	2-1359-002	SNP array	Genotyping	14
nssv15652641	copy number loss	2-1565-003	SNP array	Genotyping	21
nssv15658675	copy number gain	3-0544-000	SNP array	Genotyping	17
nssv15672844	copy number loss	9-0007-003	SNP array	Genotyping	20
nssv15674265	copy number loss	9-0025-001	SNP array	Genotyping	23
nssv15674904	copy number loss	9-0046-003	SNP array	Genotyping	21
nssv15702648	copy number loss	198406	SNP array	Genotyping	22

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15613881	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15614429	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15627695	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15632486	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15640366	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15640642	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15642700	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15647401	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15647683	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15647943	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15649243	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15650011	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15650131	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15650626	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15652641	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15658675	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15672844	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15674265	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15674904	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15702648	Remapped	Perfect	NC_000006.12:g.(?_ 257061)_(302261_?) del	GRCh38.p12	First Pass	NC_000006.12	Chr6	257,061	302,261
nssv15613881	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) del	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15614429	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) dup	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15627695	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) del	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15632486	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) del	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15640366	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) dup	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15640642	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) del	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15642700	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) del	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15647401	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) dup	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15647683	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) dup	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15647943	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) dup	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15649243	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) dup	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15650011	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) del	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15650131	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) dup	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15650626	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) del	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15652641	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) del	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15658675	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) dup	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15672844	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) del	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15674265	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) del	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15674904	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) del	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261
nssv15702648	Submitted genomic		NC_000006.11:g.(?_ 257061)_(302261_?) del	GRCh37 (hg19)		NC_000006.11	Chr6	257,061	302,261

dbVar

Database of genomic structural variation

nsv4366922

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant