nsv4367147
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:22
- Validation:Not tested
- Clinical Assertions: No
- Region Size:38,107
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1293 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 1294 SVs from 51 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4367147 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nsv4367147 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15614192 | copy number loss | 1-0713-003 | SNP array | Genotyping | 34 |
| nssv15615545 | copy number loss | 1-0795-003 | SNP array | Genotyping | 24 |
| nssv15616706 | copy number loss | 1-0876-004 | SNP array | Genotyping | 24 |
| nssv15621795 | copy number loss | 1-1036-003 | SNP array | Genotyping | 21 |
| nssv15628921 | copy number loss | 1-0543-002 | SNP array | Genotyping | 26 |
| nssv15630931 | copy number loss | 1-0629-003 | SNP array | Genotyping | 15 |
| nssv15633618 | copy number loss | 11-0032-003 | SNP array | Genotyping | 17 |
| nssv15636126 | copy number loss | 13-0109-001 | SNP array | Genotyping | 22 |
| nssv15638693 | copy number loss | 14-0010-002 | SNP array | Genotyping | 20 |
| nssv15640396 | copy number loss | 14-0152-002 | SNP array | Genotyping | 24 |
| nssv15645040 | copy number loss | 2-0285-002 | SNP array | Genotyping | 22 |
| nssv15653405 | copy number loss | 2-1731-003 | SNP array | Genotyping | 16 |
| nssv15657917 | copy number loss | 3-0437-000 | SNP array | Genotyping | 25 |
| nssv15658045 | copy number loss | 3-0537-000 | SNP array | Genotyping | 20 |
| nssv15660080 | copy number loss | 3-0639-000 | SNP array | Genotyping | 21 |
| nssv15663819 | copy number loss | 5-0126-002 | SNP array | Genotyping | 27 |
| nssv15668993 | copy number loss | 7-0104-003 | SNP array | Genotyping | 17 |
| nssv15669747 | copy number loss | 7-0243-003 | SNP array | Genotyping | 24 |
| nssv15674836 | copy number loss | 206775 | SNP array | Genotyping | 21 |
| nssv15677175 | copy number loss | 235973S | SNP array | Genotyping | 28 |
| nssv15680495 | copy number loss | 193290 | SNP array | Genotyping | 25 |
| nssv15684558 | copy number loss | OCD14-S_896272 | SNP array | Genotyping | 23 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15614192 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15615545 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15616706 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15621795 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15628921 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15630931 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15633618 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15636126 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15638693 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15640396 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15645040 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15653405 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15657917 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15658045 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15660080 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15663819 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15668993 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15669747 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15674836 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15677175 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15680495 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15684558 | Remapped | Perfect | NC_000023.11:g.(?_ 1303957)_(1342063_ ?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,303,957 | 1,342,063 |
| nssv15614192 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15615545 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15616706 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15621795 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15628921 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15630931 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15633618 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15636126 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15638693 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15640396 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15645040 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15653405 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15657917 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15658045 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15660080 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15663819 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15668993 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15669747 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15674836 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15677175 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15680495 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 | ||
| nssv15684558 | Submitted genomic | NC_000023.10:g.(?_ 1422850)_(1460956_ ?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 1,422,850 | 1,460,956 |