nsv436756
- Organism: Homo sapiens
- Study:nstd16 (Korbel et al. 2007)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:9,708
- Description:Mated-Insertion
- Publication(s):Korbel et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1289 SVs from 93 studies. See in: genome view
Overlapping variant regions from other studies: 1289 SVs from 93 studies. See in: genome view
Overlapping variant regions from other studies: 692 SVs from 28 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nsv436756 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 719,074 | 728,781 |
nsv436756 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000005.9 | Chr5 | 719,189 | 728,896 |
nsv436756 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000005.8 | Chr5 | 772,189 | 781,896 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv466194 | insertion | SAMN00001583 | Sequencing | Paired-end mapping | 822 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nssv466194 | Remapped | Perfect | NC_000005.10:g.(71 9074_?)_(?_728781) ins? | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 719,074 | 728,781 |
nssv466194 | Remapped | Perfect | NC_000005.9:g.(719 189_?)_(?_728896)i ns? | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 719,189 | 728,896 |
nssv466194 | Submitted genomic | NC_000005.8:g.(772 189_?)_(?_781896)i ns(0_?) | NCBI36 (hg18) | NC_000005.8 | Chr5 | 772,189 | 781,896 |