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dbVar

Database of genomic structural variation

nsv4367890

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:113,009

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 643 SVs from 76 studies. See in: genome view

Remapped(Score: Perfect):29,631,089-29,744,097

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4367890	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	29,631,089	29,744,097
nsv4367890	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	29,670,705	29,783,713

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15626852	copy number gain	1-0456-001	SNP array	Genotyping	23
nssv15626906	copy number gain	1-0456-004	SNP array	Genotyping	23
nssv15630661	copy number gain	1-0599-001	SNP array	Genotyping	18
nssv15651411	copy number gain	2-1430-005	SNP array	Genotyping	16
nssv15656087	copy number gain	3-0632-000	SNP array	Genotyping	28

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15626852	Remapped	Perfect	NC_000007.14:g.(?_ 29631089)_(2974409 7_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	29,631,089	29,744,097
nssv15626906	Remapped	Perfect	NC_000007.14:g.(?_ 29631089)_(2974409 7_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	29,631,089	29,744,097
nssv15630661	Remapped	Perfect	NC_000007.14:g.(?_ 29631089)_(2974409 7_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	29,631,089	29,744,097
nssv15651411	Remapped	Perfect	NC_000007.14:g.(?_ 29631089)_(2974409 7_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	29,631,089	29,744,097
nssv15656087	Remapped	Perfect	NC_000007.14:g.(?_ 29631089)_(2974409 7_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	29,631,089	29,744,097
nssv15626852	Submitted genomic		NC_000007.13:g.(?_ 29670705)_(2978371 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	29,670,705	29,783,713
nssv15626906	Submitted genomic		NC_000007.13:g.(?_ 29670705)_(2978371 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	29,670,705	29,783,713
nssv15630661	Submitted genomic		NC_000007.13:g.(?_ 29670705)_(2978371 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	29,670,705	29,783,713
nssv15651411	Submitted genomic		NC_000007.13:g.(?_ 29670705)_(2978371 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	29,670,705	29,783,713
nssv15656087	Submitted genomic		NC_000007.13:g.(?_ 29670705)_(2978371 3_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	29,670,705	29,783,713

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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