nsv4367903

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:13
Validation:Not tested
Clinical Assertions: No
Region Size:39,889

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 296 SVs from 57 studies. See in: genome view

Remapped(Score: Perfect):82,774,269-82,814,157

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4367903	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000012.12	Chr12	82,774,269	82,814,157
nsv4367903	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000012.11	Chr12	83,168,048	83,207,936

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15611951	copy number loss	1-0638-003	SNP array	Genotyping	17
nssv15617890	copy number loss	1-0876-001	SNP array	Genotyping	15
nssv15617954	copy number loss	1-0876-004	SNP array	Genotyping	24
nssv15628092	copy number loss	1-0534-005	SNP array	Genotyping	21
nssv15631012	copy number loss	1-0638-001	SNP array	Genotyping	12
nssv15646349	copy number loss	2-1169-002	SNP array	Genotyping	20
nssv15649963	copy number loss	2-1423-003	SNP array	Genotyping	29
nssv15651692	copy number loss	2-1529-001	SNP array	Genotyping	14
nssv15665519	copy number loss	7-0083-003	SNP array	Genotyping	22
nssv15676211	copy number loss	211142	SNP array	Genotyping	20
nssv15694579	copy number loss	203490	SNP array	Genotyping	15
nssv15699514	copy number loss	155498	SNP array	Genotyping	20
nssv15699538	copy number loss	156227	SNP array	Genotyping	29

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15611951	Remapped	Perfect	NC_000012.12:g.(?_ 82774269)_(8281415 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	82,774,269	82,814,157
nssv15617890	Remapped	Perfect	NC_000012.12:g.(?_ 82774269)_(8281415 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	82,774,269	82,814,157
nssv15617954	Remapped	Perfect	NC_000012.12:g.(?_ 82774269)_(8281415 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	82,774,269	82,814,157
nssv15628092	Remapped	Perfect	NC_000012.12:g.(?_ 82774269)_(8281415 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	82,774,269	82,814,157
nssv15631012	Remapped	Perfect	NC_000012.12:g.(?_ 82774269)_(8281415 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	82,774,269	82,814,157
nssv15646349	Remapped	Perfect	NC_000012.12:g.(?_ 82774269)_(8281415 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	82,774,269	82,814,157
nssv15649963	Remapped	Perfect	NC_000012.12:g.(?_ 82774269)_(8281415 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	82,774,269	82,814,157
nssv15651692	Remapped	Perfect	NC_000012.12:g.(?_ 82774269)_(8281415 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	82,774,269	82,814,157
nssv15665519	Remapped	Perfect	NC_000012.12:g.(?_ 82774269)_(8281415 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	82,774,269	82,814,157
nssv15676211	Remapped	Perfect	NC_000012.12:g.(?_ 82774269)_(8281415 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	82,774,269	82,814,157
nssv15694579	Remapped	Perfect	NC_000012.12:g.(?_ 82774269)_(8281415 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	82,774,269	82,814,157
nssv15699514	Remapped	Perfect	NC_000012.12:g.(?_ 82774269)_(8281415 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	82,774,269	82,814,157
nssv15699538	Remapped	Perfect	NC_000012.12:g.(?_ 82774269)_(8281415 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	82,774,269	82,814,157
nssv15611951	Submitted genomic		NC_000012.11:g.(?_ 83168048)_(8320793 6_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	83,168,048	83,207,936
nssv15617890	Submitted genomic		NC_000012.11:g.(?_ 83168048)_(8320793 6_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	83,168,048	83,207,936
nssv15617954	Submitted genomic		NC_000012.11:g.(?_ 83168048)_(8320793 6_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	83,168,048	83,207,936
nssv15628092	Submitted genomic		NC_000012.11:g.(?_ 83168048)_(8320793 6_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	83,168,048	83,207,936
nssv15631012	Submitted genomic		NC_000012.11:g.(?_ 83168048)_(8320793 6_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	83,168,048	83,207,936
nssv15646349	Submitted genomic		NC_000012.11:g.(?_ 83168048)_(8320793 6_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	83,168,048	83,207,936
nssv15649963	Submitted genomic		NC_000012.11:g.(?_ 83168048)_(8320793 6_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	83,168,048	83,207,936
nssv15651692	Submitted genomic		NC_000012.11:g.(?_ 83168048)_(8320793 6_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	83,168,048	83,207,936
nssv15665519	Submitted genomic		NC_000012.11:g.(?_ 83168048)_(8320793 6_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	83,168,048	83,207,936
nssv15676211	Submitted genomic		NC_000012.11:g.(?_ 83168048)_(8320793 6_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	83,168,048	83,207,936
nssv15694579	Submitted genomic		NC_000012.11:g.(?_ 83168048)_(8320793 6_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	83,168,048	83,207,936
nssv15699514	Submitted genomic		NC_000012.11:g.(?_ 83168048)_(8320793 6_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	83,168,048	83,207,936
nssv15699538	Submitted genomic		NC_000012.11:g.(?_ 83168048)_(8320793 6_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	83,168,048	83,207,936

dbVar

Database of genomic structural variation

nsv4367903

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant