nsv436820
- Organism: Homo sapiens
- Study:nstd16 (Korbel et al. 2007)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:54,899
- Description:Unmated-Insertion
- Publication(s):Korbel et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 289 SVs from 60 studies. See in: genome view
Overlapping variant regions from other studies: 289 SVs from 60 studies. See in: genome view
Overlapping variant regions from other studies: 113 SVs from 22 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv436820 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 98,931,281 | 98,986,179 |
| nsv436820 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 100,691,038 | 100,745,936 |
| nsv436820 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 100,681,028 | 100,735,926 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv466613 | insertion | SAMN00001583 | Sequencing | Paired-end mapping | 822 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv466613 | Remapped | Perfect | NC_000010.11:g.(98 931281_?)_(?_98986 179)ins? | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 98,931,281 | 98,986,179 |
| nssv466613 | Remapped | Perfect | NC_000010.10:g.(10 0691038_?)_(?_1007 45936)ins? | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 100,691,038 | 100,745,936 |
| nssv466613 | Submitted genomic | NC_000010.9:g.(100 681028_?)_(?_10073 5926)ins(0_?) | NCBI36 (hg18) | NC_000010.9 | Chr10 | 100,681,028 | 100,735,926 |