Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv4368412

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:80,009

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 263 SVs from 37 studies. See in: genome view

Remapped(Score: Perfect):11,413,234-11,493,242

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4368412	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000020.11	Chr20	11,413,234	11,493,242
nsv4368412	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000020.10	Chr20	11,393,882	11,473,890

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15643639	copy number loss	2-0018-001	SNP array	Genotyping	24
nssv15643655	copy number loss	2-0018-003	SNP array	Genotyping	23

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15643639	Remapped	Perfect	NC_000020.11:g.(?_ 11413234)_(1149324 2_?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	11,413,234	11,493,242
nssv15643655	Remapped	Perfect	NC_000020.11:g.(?_ 11413234)_(1149324 2_?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	11,413,234	11,493,242
nssv15643639	Submitted genomic		NC_000020.10:g.(?_ 11393882)_(1147389 0_?)del	GRCh37 (hg19)		NC_000020.10	Chr20	11,393,882	11,473,890
nssv15643655	Submitted genomic		NC_000020.10:g.(?_ 11393882)_(1147389 0_?)del	GRCh37 (hg19)		NC_000020.10	Chr20	11,393,882	11,473,890

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI