Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv4368463

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:9
Validation:Not tested
Clinical Assertions: No
Region Size:278,024

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2060 SVs from 101 studies. See in: genome view

Remapped(Score: Perfect):167,932,628-168,210,651

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4368463	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	167,932,628	168,210,651
nsv4368463	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	168,333,308	168,611,331

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15614784	copy number gain	1-0756-002	SNP array	Genotyping	17
nssv15614823	copy number gain	1-0756-004	SNP array	Genotyping	22
nssv15618215	copy number gain	1-0859-003	SNP array	Genotyping	17
nssv15628080	copy number gain	1-0534-004	SNP array	Genotyping	22
nssv15639581	copy number gain	14-0260-002	SNP array	Genotyping	13
nssv15660851	copy number gain	4-0052-001	SNP array	Genotyping	20
nssv15660967	copy number gain	4-0069-001	SNP array	Genotyping	24
nssv15665133	copy number gain	7-0055-003	SNP array	Genotyping	19
nssv15695677	copy number gain	OCD95-1053	SNP array	Genotyping	20

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15614784	Remapped	Perfect	NC_000006.12:g.(?_ 167932628)_(168210 651_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,932,628	168,210,651
nssv15614823	Remapped	Perfect	NC_000006.12:g.(?_ 167932628)_(168210 651_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,932,628	168,210,651
nssv15618215	Remapped	Perfect	NC_000006.12:g.(?_ 167932628)_(168210 651_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,932,628	168,210,651
nssv15628080	Remapped	Perfect	NC_000006.12:g.(?_ 167932628)_(168210 651_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,932,628	168,210,651
nssv15639581	Remapped	Perfect	NC_000006.12:g.(?_ 167932628)_(168210 651_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,932,628	168,210,651
nssv15660851	Remapped	Perfect	NC_000006.12:g.(?_ 167932628)_(168210 651_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,932,628	168,210,651
nssv15660967	Remapped	Perfect	NC_000006.12:g.(?_ 167932628)_(168210 651_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,932,628	168,210,651
nssv15665133	Remapped	Perfect	NC_000006.12:g.(?_ 167932628)_(168210 651_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,932,628	168,210,651
nssv15695677	Remapped	Perfect	NC_000006.12:g.(?_ 167932628)_(168210 651_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,932,628	168,210,651
nssv15614784	Submitted genomic		NC_000006.11:g.(?_ 168333308)_(168611 331_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,333,308	168,611,331
nssv15614823	Submitted genomic		NC_000006.11:g.(?_ 168333308)_(168611 331_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,333,308	168,611,331
nssv15618215	Submitted genomic		NC_000006.11:g.(?_ 168333308)_(168611 331_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,333,308	168,611,331
nssv15628080	Submitted genomic		NC_000006.11:g.(?_ 168333308)_(168611 331_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,333,308	168,611,331
nssv15639581	Submitted genomic		NC_000006.11:g.(?_ 168333308)_(168611 331_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,333,308	168,611,331
nssv15660851	Submitted genomic		NC_000006.11:g.(?_ 168333308)_(168611 331_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,333,308	168,611,331
nssv15660967	Submitted genomic		NC_000006.11:g.(?_ 168333308)_(168611 331_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,333,308	168,611,331
nssv15665133	Submitted genomic		NC_000006.11:g.(?_ 168333308)_(168611 331_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,333,308	168,611,331
nssv15695677	Submitted genomic		NC_000006.11:g.(?_ 168333308)_(168611 331_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,333,308	168,611,331

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI