nsv436876
- Organism: Homo sapiens
- Study:nstd16 (Korbel et al. 2007)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:175,948
- Description:Unmated-Insertion
- Publication(s):Korbel et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 253 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 255 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 113 SVs from 18 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv436876 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 49,334,148 | 49,510,095 |
| nsv436876 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 49,336,165 | 49,512,112 |
| nsv436876 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000004.10 | Chr4 | 49,030,922 | 49,206,869 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv466097 | insertion | SAMN00001583 | Sequencing | Paired-end mapping | 822 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv466097 | Remapped | Perfect | NC_000004.12:g.(49 334148_?)_(?_49510 095)ins? | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 49,334,148 | 49,510,095 |
| nssv466097 | Remapped | Perfect | NC_000004.11:g.(49 336165_?)_(?_49512 112)ins? | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 49,336,165 | 49,512,112 |
| nssv466097 | Submitted genomic | NC_000004.10:g.(49 030922_?)_(?_49206 869)ins(0_?) | NCBI36 (hg18) | NC_000004.10 | Chr4 | 49,030,922 | 49,206,869 |