nsv436880
- Organism: Homo sapiens
- Study:nstd16 (Korbel et al. 2007)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:98,468
- Description:Unmated-Insertion
- Publication(s):Korbel et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 330 SVs from 49 studies. See in: genome view
Overlapping variant regions from other studies: 383 SVs from 54 studies. See in: genome view
Overlapping variant regions from other studies: 83 SVs from 13 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv436880 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 74,458,256 | 74,556,723 | - |
| nsv436880 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 75,323,973 | - | 75,491,151 |
| nsv436880 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000004.10 | Chr4 | 75,542,837 | - | 75,710,175 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv466116 | insertion | SAMN00001583 | Sequencing | Paired-end mapping | 822 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nssv466116 | Remapped | Pass | NC_000004.12:g.(74 458256_?)_(7455672 3_?)ins? | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 74,458,256 | 74,556,723 | - |
| nssv466116 | Remapped | Good | NC_000004.11:g.(75 323973_?)_(?_75491 151)ins? | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 75,323,973 | - | 75,491,151 |
| nssv466116 | Submitted genomic | NC_000004.10:g.(75 542837_?)_(?_75710 175)ins(0_?) | NCBI36 (hg18) | NC_000004.10 | Chr4 | 75,542,837 | - | 75,710,175 |