nsv4369166

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:31
Validation:Not tested
Clinical Assertions: No
Region Size:41,345

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 815 SVs from 81 studies. See in: genome view

Remapped(Score: Perfect):13,754,122-13,795,466

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4369166	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nsv4369166	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000008.10	Chr8	13,611,631	13,652,975

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15611611	copy number loss	1-0649-003	SNP array	Genotyping	17
nssv15611901	copy number loss	1-0660-003	SNP array	Genotyping	23
nssv15613712	copy number loss	1-0718-003	SNP array	Genotyping	35
nssv15615962	copy number loss	1-0806-003	SNP array	Genotyping	23
nssv15616228	copy number loss	1-0791-003	SNP array	Genotyping	15
nssv15618584	copy number loss	1-0845-003	SNP array	Genotyping	36
nssv15630133	copy number loss	1-0634-003	SNP array	Genotyping	18
nssv15635307	copy number loss	12-4168-001	SNP array	Genotyping	25
nssv15635351	copy number loss	12-4168-004	SNP array	Genotyping	30
nssv15635395	copy number loss	12-4168-006	SNP array	Genotyping	26
nssv15635808	copy number loss	12-4168-007	SNP array	Genotyping	31
nssv15639279	copy number loss	14-0284-003	SNP array	Genotyping	25
nssv15641184	copy number loss	14-0284-004	SNP array	Genotyping	28
nssv15643958	copy number loss	16-1009-001	SNP array	Genotyping	30
nssv15644809	copy number loss	16-1009-004	SNP array	Genotyping	28
nssv15661680	copy number loss	4-0032-001	SNP array	Genotyping	39
nssv15663749	copy number loss	5-0120-003	SNP array	Genotyping	29
nssv15663814	copy number loss	5-0126-002	SNP array	Genotyping	27
nssv15665757	copy number loss	7-0092-003	SNP array	Genotyping	23
nssv15666119	copy number loss	5-0085-001	SNP array	Genotyping	21
nssv15666827	copy number loss	7-0112-003	SNP array	Genotyping	26
nssv15667334	copy number loss	7-0157-004	SNP array	Genotyping	32
nssv15667741	copy number loss	7-0058-003	SNP array	Genotyping	21
nssv15670653	copy number loss	7-0200-003	SNP array	Genotyping	24
nssv15680416	copy number loss	239189S	SNP array	Genotyping	27
nssv15681898	copy number loss	193294	SNP array	Genotyping	26
nssv15682246	copy number loss	232818S	SNP array	Genotyping	23
nssv15684268	copy number loss	OCD1132-5766	SNP array	Genotyping	19
nssv15700887	copy number loss	227110	SNP array	Genotyping	21
nssv15701994	copy number loss	199597	SNP array	Genotyping	18
nssv15702012	copy number loss	200018	SNP array	Genotyping	18

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15611611	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15611901	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15613712	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15615962	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15616228	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15618584	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15630133	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15635307	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15635351	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15635395	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15635808	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15639279	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15641184	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15643958	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15644809	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15661680	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15663749	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15663814	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15665757	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15666119	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15666827	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15667334	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15667741	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15670653	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15680416	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15681898	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15682246	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15684268	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15700887	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15701994	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15702012	Remapped	Perfect	NC_000008.11:g.(?_ 13754122)_(1379546 6_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	13,754,122	13,795,466
nssv15611611	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15611901	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15613712	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15615962	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15616228	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15618584	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15630133	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15635307	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15635351	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15635395	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15635808	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15639279	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15641184	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15643958	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15644809	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15661680	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15663749	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15663814	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15665757	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15666119	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15666827	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15667334	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15667741	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15670653	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15680416	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15681898	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15682246	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15684268	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15700887	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15701994	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975
nssv15702012	Submitted genomic		NC_000008.10:g.(?_ 13611631)_(1365297 5_?)del	GRCh37 (hg19)		NC_000008.10	Chr8	13,611,631	13,652,975

dbVar

Database of genomic structural variation

nsv4369166

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant