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dbVar

Database of genomic structural variation

nsv4369222

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:81,956

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 466 SVs from 72 studies. See in: genome view

Remapped(Score: Perfect):14,941,692-15,023,647

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4369222	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	14,941,692	15,023,647
nsv4369222	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	14,983,691	15,065,646

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15615219	copy number gain	1-0755-003	SNP array	Genotyping	20
nssv15637706	copy number gain	14-0154-003	SNP array	Genotyping	13
nssv15686269	copy number gain	OCD3-S_896083	SNP array	Genotyping	27

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15615219	Remapped	Perfect	NC_000010.11:g.(?_ 14941692)_(1502364 7_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	14,941,692	15,023,647
nssv15637706	Remapped	Perfect	NC_000010.11:g.(?_ 14941692)_(1502364 7_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	14,941,692	15,023,647
nssv15686269	Remapped	Perfect	NC_000010.11:g.(?_ 14941692)_(1502364 7_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	14,941,692	15,023,647
nssv15615219	Submitted genomic		NC_000010.10:g.(?_ 14983691)_(1506564 6_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	14,983,691	15,065,646
nssv15637706	Submitted genomic		NC_000010.10:g.(?_ 14983691)_(1506564 6_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	14,983,691	15,065,646
nssv15686269	Submitted genomic		NC_000010.10:g.(?_ 14983691)_(1506564 6_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	14,983,691	15,065,646

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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