Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv4369720

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:1,485,109

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 7293 SVs from 112 studies. See in: genome view

Remapped(Score: Pass):32,526,972-34,012,080

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4369720	Remapped	Pass	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	32,526,972	34,012,080
nsv4369720	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	32,538,293	33,814,547

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15653936	copy number loss	2-1618-001	SNP array	Genotyping	18
nssv15661627	copy number gain	4-0030-001	SNP array	Genotyping	18
nssv15678897	copy number loss	183433	SNP array	Genotyping	27

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15653936	Remapped	Pass	NC_000016.10:g.(?_ 32526972)_(3401208 0_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	32,526,972	34,012,080
nssv15661627	Remapped	Pass	NC_000016.10:g.(?_ 32526972)_(3401208 0_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	32,526,972	34,012,080
nssv15678897	Remapped	Pass	NC_000016.10:g.(?_ 32526972)_(3401208 0_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	32,526,972	34,012,080
nssv15653936	Submitted genomic		NC_000016.9:g.(?_3 2538293)_(33814547 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	32,538,293	33,814,547
nssv15661627	Submitted genomic		NC_000016.9:g.(?_3 2538293)_(33814547 _?)dup	GRCh37 (hg19)		NC_000016.9	Chr16	32,538,293	33,814,547
nssv15678897	Submitted genomic		NC_000016.9:g.(?_3 2538293)_(33814547 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	32,538,293	33,814,547

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI