Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv436973

Organism: Homo sapiens

Study:nstd17 (Conrad et al. 2005)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI34 (hg16)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:203,748

Publication(s):Conrad et al. 2005

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1021 SVs from 91 studies. See in: genome view

Remapped(Score: Perfect):167,874,030-168,077,777

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv436973	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	167,874,030	167,887,394	168,040,205	168,077,777
nsv436973	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	168,795,181	168,808,545	168,961,356	168,998,928
nsv436973	Submitted genomic		NCBI34 (hg16)	Primary Assembly		NC_000004.8	Chr4	169,491,071	169,504,435	169,657,246	169,694,818

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
nssv466854	copy number loss	NA10857	SNP array	SNP genotyping analysis	Heterozygous	14

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv466854	Remapped	Perfect	NC_000004.12:g.(16 7874030_167887394) _(168040205_168077 777)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	167,874,030	167,887,394	168,040,205	168,077,777
nssv466854	Remapped	Perfect	NC_000004.11:g.(16 8795181_168808545) _(168961356_168998 928)del	GRCh37.p13	First Pass	NC_000004.11	Chr4	168,795,181	168,808,545	168,961,356	168,998,928
nssv466854	Submitted genomic		NC_000004.8:g.(169 491071_169504435)_ (169657246_1696948 18)del	NCBI34 (hg16)		NC_000004.8	Chr4	169,491,071	169,504,435	169,657,246	169,694,818

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI