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dbVar

Database of genomic structural variation

nsv4369816

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:6
Validation:Not tested
Clinical Assertions: No
Region Size:27,561

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 796 SVs from 86 studies. See in: genome view

Remapped(Score: Perfect):76,575,873-76,603,433

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4369816	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	76,575,873	76,603,433
nsv4369816	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	76,868,214	76,895,774

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15618532	copy number gain	1-0901-004	SNP array	Genotyping	19
nssv15620555	copy number gain	1-0944-003	SNP array	Genotyping	24
nssv15621946	copy number gain	1-0974-003	SNP array	Genotyping	19
nssv15654900	copy number gain	2-1631-001	SNP array	Genotyping	21
nssv15668253	copy number gain	7-0183-003	SNP array	Genotyping	21
nssv15700491	copy number gain	181146	SNP array	Genotyping	24

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15618532	Remapped	Perfect	NC_000015.10:g.(?_ 76575873)_(7660343 3_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	76,575,873	76,603,433
nssv15620555	Remapped	Perfect	NC_000015.10:g.(?_ 76575873)_(7660343 3_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	76,575,873	76,603,433
nssv15621946	Remapped	Perfect	NC_000015.10:g.(?_ 76575873)_(7660343 3_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	76,575,873	76,603,433
nssv15654900	Remapped	Perfect	NC_000015.10:g.(?_ 76575873)_(7660343 3_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	76,575,873	76,603,433
nssv15668253	Remapped	Perfect	NC_000015.10:g.(?_ 76575873)_(7660343 3_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	76,575,873	76,603,433
nssv15700491	Remapped	Perfect	NC_000015.10:g.(?_ 76575873)_(7660343 3_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	76,575,873	76,603,433
nssv15618532	Submitted genomic		NC_000015.9:g.(?_7 6868214)_(76895774 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	76,868,214	76,895,774
nssv15620555	Submitted genomic		NC_000015.9:g.(?_7 6868214)_(76895774 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	76,868,214	76,895,774
nssv15621946	Submitted genomic		NC_000015.9:g.(?_7 6868214)_(76895774 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	76,868,214	76,895,774
nssv15654900	Submitted genomic		NC_000015.9:g.(?_7 6868214)_(76895774 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	76,868,214	76,895,774
nssv15668253	Submitted genomic		NC_000015.9:g.(?_7 6868214)_(76895774 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	76,868,214	76,895,774
nssv15700491	Submitted genomic		NC_000015.9:g.(?_7 6868214)_(76895774 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	76,868,214	76,895,774

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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