nsv4369911
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:9
- Validation:Not tested
- Clinical Assertions: No
- Region Size:75,220
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1701 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 1331 SVs from 79 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4369911 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 106,696,133 | 106,771,352 |
| nsv4369911 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000014.8 | Chr14 | 107,152,150 | 107,179,594 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15618817 | copy number gain | 1-0889-003 | SNP array | Genotyping | 18 |
| nssv15631402 | copy number gain | 1-0092-005 | SNP array | Genotyping | 29 |
| nssv15634627 | copy number gain | 12-4310-002 | SNP array | Genotyping | 21 |
| nssv15637542 | copy number gain | 14-0124-003 | SNP array | Genotyping | 24 |
| nssv15637752 | copy number gain | 14-0170-001 | SNP array | Genotyping | 29 |
| nssv15639007 | copy number gain | 14-0243-004 | SNP array | Genotyping | 24 |
| nssv15639817 | copy number gain | 14-0227-002 | SNP array | Genotyping | 19 |
| nssv15662910 | copy number gain | 6-0379-004 | SNP array | Genotyping | 27 |
| nssv15666835 | copy number gain | 7-0113-003 | SNP array | Genotyping | 19 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15618817 | Remapped | Pass | NC_000014.9:g.(?_1 06696133)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,696,133 | 106,771,352 |
| nssv15631402 | Remapped | Pass | NC_000014.9:g.(?_1 06696133)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,696,133 | 106,771,352 |
| nssv15634627 | Remapped | Pass | NC_000014.9:g.(?_1 06696133)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,696,133 | 106,771,352 |
| nssv15637542 | Remapped | Pass | NC_000014.9:g.(?_1 06696133)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,696,133 | 106,771,352 |
| nssv15637752 | Remapped | Pass | NC_000014.9:g.(?_1 06696133)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,696,133 | 106,771,352 |
| nssv15639007 | Remapped | Pass | NC_000014.9:g.(?_1 06696133)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,696,133 | 106,771,352 |
| nssv15639817 | Remapped | Pass | NC_000014.9:g.(?_1 06696133)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,696,133 | 106,771,352 |
| nssv15662910 | Remapped | Pass | NC_000014.9:g.(?_1 06696133)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,696,133 | 106,771,352 |
| nssv15666835 | Remapped | Pass | NC_000014.9:g.(?_1 06696133)_(1067713 52_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,696,133 | 106,771,352 |
| nssv15618817 | Submitted genomic | NC_000014.8:g.(?_1 07152150)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,152,150 | 107,179,594 | ||
| nssv15631402 | Submitted genomic | NC_000014.8:g.(?_1 07152150)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,152,150 | 107,179,594 | ||
| nssv15634627 | Submitted genomic | NC_000014.8:g.(?_1 07152150)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,152,150 | 107,179,594 | ||
| nssv15637542 | Submitted genomic | NC_000014.8:g.(?_1 07152150)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,152,150 | 107,179,594 | ||
| nssv15637752 | Submitted genomic | NC_000014.8:g.(?_1 07152150)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,152,150 | 107,179,594 | ||
| nssv15639007 | Submitted genomic | NC_000014.8:g.(?_1 07152150)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,152,150 | 107,179,594 | ||
| nssv15639817 | Submitted genomic | NC_000014.8:g.(?_1 07152150)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,152,150 | 107,179,594 | ||
| nssv15662910 | Submitted genomic | NC_000014.8:g.(?_1 07152150)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,152,150 | 107,179,594 | ||
| nssv15666835 | Submitted genomic | NC_000014.8:g.(?_1 07152150)_(1071795 94_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,152,150 | 107,179,594 |