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dbVar

Database of genomic structural variation

nsv4369970

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:43,757

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 668 SVs from 82 studies. See in: genome view

Remapped(Score: Perfect):19,591,676-19,635,432

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4369970	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000017.11	Chr17	19,591,676	19,635,432
nsv4369970	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000017.10	Chr17	19,494,989	19,538,745

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15623404	copy number loss	1-0236-002	SNP array	Genotyping	23
nssv15674126	copy number loss	9-0041-002	SNP array	Genotyping	23
nssv15698687	copy number loss	160874	SNP array	Genotyping	9

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15623404	Remapped	Perfect	NC_000017.11:g.(?_ 19591676)_(1963543 2_?)del	GRCh38.p12	First Pass	NC_000017.11	Chr17	19,591,676	19,635,432
nssv15674126	Remapped	Perfect	NC_000017.11:g.(?_ 19591676)_(1963543 2_?)del	GRCh38.p12	First Pass	NC_000017.11	Chr17	19,591,676	19,635,432
nssv15698687	Remapped	Perfect	NC_000017.11:g.(?_ 19591676)_(1963543 2_?)del	GRCh38.p12	First Pass	NC_000017.11	Chr17	19,591,676	19,635,432
nssv15623404	Submitted genomic		NC_000017.10:g.(?_ 19494989)_(1953874 5_?)del	GRCh37 (hg19)		NC_000017.10	Chr17	19,494,989	19,538,745
nssv15674126	Submitted genomic		NC_000017.10:g.(?_ 19494989)_(1953874 5_?)del	GRCh37 (hg19)		NC_000017.10	Chr17	19,494,989	19,538,745
nssv15698687	Submitted genomic		NC_000017.10:g.(?_ 19494989)_(1953874 5_?)del	GRCh37 (hg19)		NC_000017.10	Chr17	19,494,989	19,538,745

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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