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dbVar

Database of genomic structural variation

nsv437027

Organism: Homo sapiens

Study:nstd17 (Conrad et al. 2005)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI34 (hg16)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:78,987

Publication(s):Conrad et al. 2005

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 631 SVs from 81 studies. See in: genome view

Remapped(Score: Perfect):111,173,809-111,252,795

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv437027	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	111,173,809	111,198,042	111,241,662	111,252,795
nsv437027	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	110,813,865	110,838,098	110,881,718	110,892,851
nsv437027	Submitted genomic		NCBI34 (hg16)	Primary Assembly		NC_000007.10	Chr7	110,374,396	110,398,629	110,442,249	110,453,382

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
nssv466908	copy number loss	NA10861	SNP array	SNP genotyping analysis	Heterozygous	9

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv466908	Remapped	Perfect	NC_000007.14:g.(11 1173809_111198042) _(111241662_111252 795)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	111,173,809	111,198,042	111,241,662	111,252,795
nssv466908	Remapped	Perfect	NC_000007.13:g.(11 0813865_110838098) _(110881718_110892 851)del	GRCh37.p13	First Pass	NC_000007.13	Chr7	110,813,865	110,838,098	110,881,718	110,892,851
nssv466908	Submitted genomic		NC_000007.10:g.(11 0374396_110398629) _(110442249_110453 382)del	NCBI34 (hg16)		NC_000007.10	Chr7	110,374,396	110,398,629	110,442,249	110,453,382

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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