nsv4370364
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:28
- Validation:Not tested
- Clinical Assertions: No
- Region Size:118,886
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1901 SVs from 95 studies. See in: genome view
Overlapping variant regions from other studies: 1901 SVs from 95 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4370364 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nsv4370364 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15611940 | copy number gain | 1-0638-002 | SNP array | Genotyping | 20 |
| nssv15614179 | copy number gain | 1-0700-003 | SNP array | Genotyping | 26 |
| nssv15622488 | copy number loss | 1-0219-001 | SNP array | Genotyping | 18 |
| nssv15625628 | copy number gain | 1-0345-003 | SNP array | Genotyping | 25 |
| nssv15626084 | copy number gain | 1-0432-001 | SNP array | Genotyping | 25 |
| nssv15626100 | copy number gain | 1-0432-002 | SNP array | Genotyping | 17 |
| nssv15626508 | copy number gain | 1-0441-002 | SNP array | Genotyping | 18 |
| nssv15629541 | copy number loss | 1-0083-002 | SNP array | Genotyping | 18 |
| nssv15629749 | copy number loss | 1-0083-003 | SNP array | Genotyping | 19 |
| nssv15634350 | copy number loss | 11-0036-003 | SNP array | Genotyping | 21 |
| nssv15639085 | copy number loss | 14-0246-004 | SNP array | Genotyping | 24 |
| nssv15641774 | copy number gain | 14-0273-004 | SNP array | Genotyping | 24 |
| nssv15643623 | copy number loss | 2-0003-004 | SNP array | Genotyping | 17 |
| nssv15644516 | copy number gain | 15-1123-003 | SNP array | Genotyping | 15 |
| nssv15645404 | copy number loss | 2-0171-003 | SNP array | Genotyping | 22 |
| nssv15645889 | copy number loss | 2-0285-004 | SNP array | Genotyping | 13 |
| nssv15658229 | copy number loss | 4-0001-002 | SNP array | Genotyping | 14 |
| nssv15665366 | copy number loss | 7-0032-003 | SNP array | Genotyping | 25 |
| nssv15669964 | copy number gain | 7-0257-003 | SNP array | Genotyping | 18 |
| nssv15673016 | copy number loss | 9-0020-003 | SNP array | Genotyping | 22 |
| nssv15673387 | copy number loss | 9-0039-002 | SNP array | Genotyping | 30 |
| nssv15675798 | copy number loss | 175082 | SNP array | Genotyping | 21 |
| nssv15676974 | copy number loss | 190643 | SNP array | Genotyping | 14 |
| nssv15678717 | copy number loss | 169157 | SNP array | Genotyping | 15 |
| nssv15680185 | copy number loss | 222683 | SNP array | Genotyping | 21 |
| nssv15680860 | copy number loss | 232715S | SNP array | Genotyping | 25 |
| nssv15685511 | copy number loss | OCD127-896973 | SNP array | Genotyping | 31 |
| nssv15693272 | copy number gain | OCD9-S_896152 | SNP array | Genotyping | 16 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15611940 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15614179 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15622488 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15625628 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15626084 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15626100 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15626508 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15629541 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15629749 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15634350 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15639085 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15641774 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15643623 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15644516 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15645404 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15645889 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15658229 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15665366 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15669964 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15673016 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15673387 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15675798 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15676974 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15678717 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15680185 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15680860 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15685511 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15693272 | Remapped | Perfect | NC_000004.12:g.(?_ 68501375)_(6862026 0_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,501,375 | 68,620,260 |
| nssv15611940 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)dup | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15614179 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)dup | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15622488 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15625628 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)dup | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15626084 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)dup | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15626100 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)dup | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15626508 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)dup | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15629541 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15629749 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15634350 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15639085 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15641774 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)dup | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15643623 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15644516 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)dup | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15645404 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15645889 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15658229 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15665366 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15669964 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)dup | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15673016 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15673387 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15675798 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15676974 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15678717 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15680185 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15680860 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15685511 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 | ||
| nssv15693272 | Submitted genomic | NC_000004.11:g.(?_ 69367093)_(6948597 8_?)dup | GRCh37 (hg19) | NC_000004.11 | Chr4 | 69,367,093 | 69,485,978 |