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dbVar

Database of genomic structural variation

nsv437053

Organism: Homo sapiens

Study:nstd17 (Conrad et al. 2005)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI34 (hg16)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:104,010

Publication(s):Conrad et al. 2005

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 541 SVs from 64 studies. See in: genome view

Remapped(Score: Perfect):15,210,471-15,314,480

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv437053	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	15,210,471	15,215,594	15,305,086	15,314,480
nsv437053	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000008.10	Chr8	15,067,980	15,073,103	15,162,595	15,171,989
nsv437053	Submitted genomic		NCBI34 (hg16)	Primary Assembly		NC_000008.8	Chr8	15,078,346	15,083,469	15,172,961	15,182,355

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
nssv466934	copy number loss	NA10863	SNP array	SNP genotyping analysis	Heterozygous	20

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv466934	Remapped	Perfect	NC_000008.11:g.(15 210471_15215594)_( 15305086_15314480) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	15,210,471	15,215,594	15,305,086	15,314,480
nssv466934	Remapped	Perfect	NC_000008.10:g.(15 067980_15073103)_( 15162595_15171989) del	GRCh37.p13	First Pass	NC_000008.10	Chr8	15,067,980	15,073,103	15,162,595	15,171,989
nssv466934	Submitted genomic		NC_000008.8:g.(150 78346_15083469)_(1 5172961_15182355)d el	NCBI34 (hg16)		NC_000008.8	Chr8	15,078,346	15,083,469	15,172,961	15,182,355

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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