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dbVar

Database of genomic structural variation

nsv4370537

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:8
Validation:Not tested
Clinical Assertions: No
Region Size:61,287

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 901 SVs from 96 studies. See in: genome view

Remapped(Score: Perfect):11,350,291-11,411,577

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4370537	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000012.12	Chr12	11,350,291	11,411,577
nsv4370537	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000012.11	Chr12	11,503,225	11,564,511

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15617281	copy number loss	1-0832-003	SNP array	Genotyping	21
nssv15619514	copy number loss	1-0185-003	SNP array	Genotyping	16
nssv15630036	copy number loss	1-0599-005	SNP array	Genotyping	23
nssv15633605	copy number loss	11-0032-003	SNP array	Genotyping	17
nssv15635712	copy number loss	11-0054-003	SNP array	Genotyping	22
nssv15637043	copy number loss	14-0024-004	SNP array	Genotyping	25
nssv15653202	copy number loss	2-1637-003	SNP array	Genotyping	24
nssv15670521	copy number loss	7-0177-003	SNP array	Genotyping	19

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15617281	Remapped	Perfect	NC_000012.12:g.(?_ 11350291)_(1141157 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,350,291	11,411,577
nssv15619514	Remapped	Perfect	NC_000012.12:g.(?_ 11350291)_(1141157 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,350,291	11,411,577
nssv15630036	Remapped	Perfect	NC_000012.12:g.(?_ 11350291)_(1141157 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,350,291	11,411,577
nssv15633605	Remapped	Perfect	NC_000012.12:g.(?_ 11350291)_(1141157 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,350,291	11,411,577
nssv15635712	Remapped	Perfect	NC_000012.12:g.(?_ 11350291)_(1141157 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,350,291	11,411,577
nssv15637043	Remapped	Perfect	NC_000012.12:g.(?_ 11350291)_(1141157 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,350,291	11,411,577
nssv15653202	Remapped	Perfect	NC_000012.12:g.(?_ 11350291)_(1141157 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,350,291	11,411,577
nssv15670521	Remapped	Perfect	NC_000012.12:g.(?_ 11350291)_(1141157 7_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	11,350,291	11,411,577
nssv15617281	Submitted genomic		NC_000012.11:g.(?_ 11503225)_(1156451 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,503,225	11,564,511
nssv15619514	Submitted genomic		NC_000012.11:g.(?_ 11503225)_(1156451 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,503,225	11,564,511
nssv15630036	Submitted genomic		NC_000012.11:g.(?_ 11503225)_(1156451 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,503,225	11,564,511
nssv15633605	Submitted genomic		NC_000012.11:g.(?_ 11503225)_(1156451 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,503,225	11,564,511
nssv15635712	Submitted genomic		NC_000012.11:g.(?_ 11503225)_(1156451 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,503,225	11,564,511
nssv15637043	Submitted genomic		NC_000012.11:g.(?_ 11503225)_(1156451 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,503,225	11,564,511
nssv15653202	Submitted genomic		NC_000012.11:g.(?_ 11503225)_(1156451 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,503,225	11,564,511
nssv15670521	Submitted genomic		NC_000012.11:g.(?_ 11503225)_(1156451 1_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	11,503,225	11,564,511

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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