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dbVar

Database of genomic structural variation

nsv437072

Organism: Homo sapiens

Study:nstd17 (Conrad et al. 2005)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI34 (hg16)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:103,151

Publication(s):Conrad et al. 2005

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1812 SVs from 90 studies. See in: genome view

Remapped(Score: Perfect):39,444,668-39,547,818

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv437072	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	39,444,668	39,474,801	39,504,816	39,547,818
nsv437072	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000008.10	Chr8	39,302,187	39,332,320	39,362,335	39,405,337
nsv437072	Submitted genomic		NCBI34 (hg16)	Primary Assembly		NC_000008.8	Chr8	39,319,555	39,349,688	39,379,703	39,422,705

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
nssv466953	copy number loss	NA10860	SNP array	SNP genotyping analysis	Heterozygous	9

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv466953	Remapped	Perfect	NC_000008.11:g.(39 444668_39474801)_( 39504816_39547818) del	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,444,668	39,474,801	39,504,816	39,547,818
nssv466953	Remapped	Perfect	NC_000008.10:g.(39 302187_39332320)_( 39362335_39405337) del	GRCh37.p13	First Pass	NC_000008.10	Chr8	39,302,187	39,332,320	39,362,335	39,405,337
nssv466953	Submitted genomic		NC_000008.8:g.(393 19555_39349688)_(3 9379703_39422705)d el	NCBI34 (hg16)		NC_000008.8	Chr8	39,319,555	39,349,688	39,379,703	39,422,705

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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