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dbVar

Database of genomic structural variation

nsv4370817

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:8
Validation:Not tested
Clinical Assertions: No
Region Size:91,915

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 924 SVs from 98 studies. See in: genome view

Remapped(Score: Perfect):38,255,505-38,347,419

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4370817	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	38,255,505	38,347,419
nsv4370817	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	38,295,106	38,387,020

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15618145	copy number gain	1-0885-003	SNP array	Genotyping	20
nssv15642107	copy number gain	15-1130-003	SNP array	Genotyping	18
nssv15644543	copy number gain	15-1126-001	SNP array	Genotyping	25
nssv15646787	copy number gain	2-1085-004	SNP array	Genotyping	20
nssv15671623	copy number gain	9-0003-001	SNP array	Genotyping	28
nssv15677752	copy number gain	234354	SNP array	Genotyping	24
nssv15679851	copy number gain	211145	SNP array	Genotyping	23
nssv15681303	copy number gain	13AG1244	SNP array	Genotyping	30

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15618145	Remapped	Perfect	NC_000007.14:g.(?_ 38255505)_(3834741 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,255,505	38,347,419
nssv15642107	Remapped	Perfect	NC_000007.14:g.(?_ 38255505)_(3834741 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,255,505	38,347,419
nssv15644543	Remapped	Perfect	NC_000007.14:g.(?_ 38255505)_(3834741 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,255,505	38,347,419
nssv15646787	Remapped	Perfect	NC_000007.14:g.(?_ 38255505)_(3834741 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,255,505	38,347,419
nssv15671623	Remapped	Perfect	NC_000007.14:g.(?_ 38255505)_(3834741 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,255,505	38,347,419
nssv15677752	Remapped	Perfect	NC_000007.14:g.(?_ 38255505)_(3834741 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,255,505	38,347,419
nssv15679851	Remapped	Perfect	NC_000007.14:g.(?_ 38255505)_(3834741 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,255,505	38,347,419
nssv15681303	Remapped	Perfect	NC_000007.14:g.(?_ 38255505)_(3834741 9_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	38,255,505	38,347,419
nssv15618145	Submitted genomic		NC_000007.13:g.(?_ 38295106)_(3838702 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,106	38,387,020
nssv15642107	Submitted genomic		NC_000007.13:g.(?_ 38295106)_(3838702 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,106	38,387,020
nssv15644543	Submitted genomic		NC_000007.13:g.(?_ 38295106)_(3838702 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,106	38,387,020
nssv15646787	Submitted genomic		NC_000007.13:g.(?_ 38295106)_(3838702 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,106	38,387,020
nssv15671623	Submitted genomic		NC_000007.13:g.(?_ 38295106)_(3838702 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,106	38,387,020
nssv15677752	Submitted genomic		NC_000007.13:g.(?_ 38295106)_(3838702 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,106	38,387,020
nssv15679851	Submitted genomic		NC_000007.13:g.(?_ 38295106)_(3838702 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,106	38,387,020
nssv15681303	Submitted genomic		NC_000007.13:g.(?_ 38295106)_(3838702 0_?)dup	GRCh37 (hg19)		NC_000007.13	Chr7	38,295,106	38,387,020

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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