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dbVar

Database of genomic structural variation

nsv4371856

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:48,516

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 467 SVs from 42 studies. See in: genome view

Remapped(Score: Perfect):93,054,662-93,103,177

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4371856	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	93,054,662	93,103,177
nsv4371856	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	92,309,661	92,358,176

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15643697	copy number loss	2-0122-001	SNP array	Genotyping	17
nssv15643732	copy number loss	2-0122-003	SNP array	Genotyping	16

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15643697	Remapped	Perfect	NC_000023.11:g.(?_ 93054662)_(9310317 7_?)del	GRCh38.p12	First Pass	NC_000023.11	ChrX	93,054,662	93,103,177
nssv15643732	Remapped	Perfect	NC_000023.11:g.(?_ 93054662)_(9310317 7_?)del	GRCh38.p12	First Pass	NC_000023.11	ChrX	93,054,662	93,103,177
nssv15643697	Submitted genomic		NC_000023.10:g.(?_ 92309661)_(9235817 6_?)del	GRCh37 (hg19)		NC_000023.10	ChrX	92,309,661	92,358,176
nssv15643732	Submitted genomic		NC_000023.10:g.(?_ 92309661)_(9235817 6_?)del	GRCh37 (hg19)		NC_000023.10	ChrX	92,309,661	92,358,176

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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