nsv4372205
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:14
- Validation:Not tested
- Clinical Assertions: No
- Region Size:532,370
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2874 SVs from 96 studies. See in: genome view
Overlapping variant regions from other studies: 3011 SVs from 102 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4372205 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nsv4372205 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15612656 | copy number gain | 1-0704-005 | SNP array | Genotyping | 21 |
| nssv15627323 | copy number gain | 1-0057-003 | SNP array | Genotyping | 21 |
| nssv15665102 | copy number gain | 14AG81 | SNP array | Genotyping | 16 |
| nssv15672536 | copy number gain | 9-0009-002 | SNP array | Genotyping | 23 |
| nssv15673549 | copy number gain | 9-0042-002 | SNP array | Genotyping | 21 |
| nssv15681862 | copy number gain | OCD1118-896763 | SNP array | Genotyping | 25 |
| nssv15685585 | copy number gain | OCD129-8961042 | SNP array | Genotyping | 23 |
| nssv15690233 | copy number gain | OCD132-8961112 | SNP array | Genotyping | 15 |
| nssv15690882 | copy number gain | OCD171-BS-363_1771 | SNP array | Genotyping | 15 |
| nssv15691081 | copy number gain | OCD25-S_896502 | SNP array | Genotyping | 13 |
| nssv15693068 | copy number gain | OCD83-896812 | SNP array | Genotyping | 19 |
| nssv15693673 | copy number gain | OCD99-1549(293) | SNP array | Genotyping | 24 |
| nssv15695299 | copy number gain | 159369 | SNP array | Genotyping | 23 |
| nssv15699772 | copy number gain | 226267 | SNP array | Genotyping | 35 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15612656 | Remapped | Good | NC_000014.9:g.(?_2 1972924)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nssv15627323 | Remapped | Good | NC_000014.9:g.(?_2 1972924)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nssv15665102 | Remapped | Good | NC_000014.9:g.(?_2 1972924)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nssv15672536 | Remapped | Good | NC_000014.9:g.(?_2 1972924)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nssv15673549 | Remapped | Good | NC_000014.9:g.(?_2 1972924)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nssv15681862 | Remapped | Good | NC_000014.9:g.(?_2 1972924)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nssv15685585 | Remapped | Good | NC_000014.9:g.(?_2 1972924)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nssv15690233 | Remapped | Good | NC_000014.9:g.(?_2 1972924)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nssv15690882 | Remapped | Good | NC_000014.9:g.(?_2 1972924)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nssv15691081 | Remapped | Good | NC_000014.9:g.(?_2 1972924)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nssv15693068 | Remapped | Good | NC_000014.9:g.(?_2 1972924)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nssv15693673 | Remapped | Good | NC_000014.9:g.(?_2 1972924)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nssv15695299 | Remapped | Good | NC_000014.9:g.(?_2 1972924)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nssv15699772 | Remapped | Good | NC_000014.9:g.(?_2 1972924)_(22505293 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,972,924 | 22,505,293 |
| nssv15612656 | Submitted genomic | NC_000014.8:g.(?_2 2441153)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 | ||
| nssv15627323 | Submitted genomic | NC_000014.8:g.(?_2 2441153)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 | ||
| nssv15665102 | Submitted genomic | NC_000014.8:g.(?_2 2441153)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 | ||
| nssv15672536 | Submitted genomic | NC_000014.8:g.(?_2 2441153)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 | ||
| nssv15673549 | Submitted genomic | NC_000014.8:g.(?_2 2441153)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 | ||
| nssv15681862 | Submitted genomic | NC_000014.8:g.(?_2 2441153)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 | ||
| nssv15685585 | Submitted genomic | NC_000014.8:g.(?_2 2441153)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 | ||
| nssv15690233 | Submitted genomic | NC_000014.8:g.(?_2 2441153)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 | ||
| nssv15690882 | Submitted genomic | NC_000014.8:g.(?_2 2441153)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 | ||
| nssv15691081 | Submitted genomic | NC_000014.8:g.(?_2 2441153)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 | ||
| nssv15693068 | Submitted genomic | NC_000014.8:g.(?_2 2441153)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 | ||
| nssv15693673 | Submitted genomic | NC_000014.8:g.(?_2 2441153)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 | ||
| nssv15695299 | Submitted genomic | NC_000014.8:g.(?_2 2441153)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 | ||
| nssv15699772 | Submitted genomic | NC_000014.8:g.(?_2 2441153)_(22974280 _?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 22,441,153 | 22,974,280 |