nsv4372335
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:15
- Validation:Not tested
- Clinical Assertions: No
- Region Size:21,428
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1368 SVs from 87 studies. See in: genome view
Overlapping variant regions from other studies: 1234 SVs from 75 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4372335 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nsv4372335 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15621526 | copy number gain | 1-1020-004 | SNP array | Genotyping | 20 |
| nssv15621847 | copy number gain | 1-1040-003 | SNP array | Genotyping | 20 |
| nssv15622466 | copy number gain | 1-1060-003 | SNP array | Genotyping | 26 |
| nssv15623109 | copy number gain | 1-1054-003 | SNP array | Genotyping | 19 |
| nssv15632681 | copy number gain | 1-1063-004 | SNP array | Genotyping | 24 |
| nssv15634020 | copy number gain | 11-0021-005 | SNP array | Genotyping | 36 |
| nssv15635456 | copy number gain | 12-4425-005 | SNP array | Genotyping | 24 |
| nssv15636132 | copy number gain | 13-0109-002 | SNP array | Genotyping | 21 |
| nssv15636596 | copy number gain | 13-0135-002 | SNP array | Genotyping | 31 |
| nssv15638194 | copy number gain | 14-0139-002 | SNP array | Genotyping | 11 |
| nssv15638345 | copy number gain | 14-0062-004 | SNP array | Genotyping | 19 |
| nssv15640084 | copy number gain | 14-0112-002 | SNP array | Genotyping | 14 |
| nssv15652630 | copy number gain | 2-1565-003 | SNP array | Genotyping | 21 |
| nssv15654595 | copy number gain | 2-1741-003 | SNP array | Genotyping | 15 |
| nssv15661030 | copy number gain | 4-0070-001 | SNP array | Genotyping | 21 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15621526 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15621847 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15622466 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15623109 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15632681 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15634020 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15635456 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15636132 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15636596 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15638194 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15638345 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15640084 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15652630 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15654595 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15661030 | Remapped | Good | NC_000014.9:g.(?_1 06697248)_(1067186 75_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,697,248 | 106,718,675 |
| nssv15621526 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 | ||
| nssv15621847 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 | ||
| nssv15622466 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 | ||
| nssv15623109 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 | ||
| nssv15632681 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 | ||
| nssv15634020 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 | ||
| nssv15635456 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 | ||
| nssv15636132 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 | ||
| nssv15636596 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 | ||
| nssv15638194 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 | ||
| nssv15638345 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 | ||
| nssv15640084 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 | ||
| nssv15652630 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 | ||
| nssv15654595 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 | ||
| nssv15661030 | Submitted genomic | NC_000014.8:g.(?_1 07153265)_(1071739 22_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,153,265 | 107,173,922 |