nsv4372664
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:11
- Validation:Not tested
- Clinical Assertions: No
- Region Size:24,237
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1400 SVs from 89 studies. See in: genome view
Overlapping variant regions from other studies: 1260 SVs from 77 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4372664 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 106,694,427 | 106,718,663 |
| nsv4372664 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000014.8 | Chr14 | 107,150,444 | 107,173,910 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15611934 | copy number gain | 1-0638-002 | SNP array | Genotyping | 20 |
| nssv15612655 | copy number gain | 1-0704-005 | SNP array | Genotyping | 21 |
| nssv15619327 | copy number gain | 1-0897-003 | SNP array | Genotyping | 17 |
| nssv15619368 | copy number gain | 1-0899-003 | SNP array | Genotyping | 27 |
| nssv15630141 | copy number gain | 1-0634-003 | SNP array | Genotyping | 18 |
| nssv15637174 | copy number gain | 12-4855-003 | SNP array | Genotyping | 27 |
| nssv15642114 | copy number gain | 16-1001-001 | SNP array | Genotyping | 28 |
| nssv15661626 | copy number gain | 4-0030-001 | SNP array | Genotyping | 18 |
| nssv15677297 | copy number gain | 237804S | SNP array | Genotyping | 26 |
| nssv15691393 | copy number gain | OCD42-S_0625-2765-1 | SNP array | Genotyping | 28 |
| nssv15700894 | copy number gain | 227889 | SNP array | Genotyping | 23 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15611934 | Remapped | Good | NC_000014.9:g.(?_1 06694427)_(1067186 63_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,694,427 | 106,718,663 |
| nssv15612655 | Remapped | Good | NC_000014.9:g.(?_1 06694427)_(1067186 63_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,694,427 | 106,718,663 |
| nssv15619327 | Remapped | Good | NC_000014.9:g.(?_1 06694427)_(1067186 63_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,694,427 | 106,718,663 |
| nssv15619368 | Remapped | Good | NC_000014.9:g.(?_1 06694427)_(1067186 63_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,694,427 | 106,718,663 |
| nssv15630141 | Remapped | Good | NC_000014.9:g.(?_1 06694427)_(1067186 63_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,694,427 | 106,718,663 |
| nssv15637174 | Remapped | Good | NC_000014.9:g.(?_1 06694427)_(1067186 63_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,694,427 | 106,718,663 |
| nssv15642114 | Remapped | Good | NC_000014.9:g.(?_1 06694427)_(1067186 63_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,694,427 | 106,718,663 |
| nssv15661626 | Remapped | Good | NC_000014.9:g.(?_1 06694427)_(1067186 63_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,694,427 | 106,718,663 |
| nssv15677297 | Remapped | Good | NC_000014.9:g.(?_1 06694427)_(1067186 63_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,694,427 | 106,718,663 |
| nssv15691393 | Remapped | Good | NC_000014.9:g.(?_1 06694427)_(1067186 63_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,694,427 | 106,718,663 |
| nssv15700894 | Remapped | Good | NC_000014.9:g.(?_1 06694427)_(1067186 63_?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 106,694,427 | 106,718,663 |
| nssv15611934 | Submitted genomic | NC_000014.8:g.(?_1 07150444)_(1071739 10_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,150,444 | 107,173,910 | ||
| nssv15612655 | Submitted genomic | NC_000014.8:g.(?_1 07150444)_(1071739 10_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,150,444 | 107,173,910 | ||
| nssv15619327 | Submitted genomic | NC_000014.8:g.(?_1 07150444)_(1071739 10_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,150,444 | 107,173,910 | ||
| nssv15619368 | Submitted genomic | NC_000014.8:g.(?_1 07150444)_(1071739 10_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,150,444 | 107,173,910 | ||
| nssv15630141 | Submitted genomic | NC_000014.8:g.(?_1 07150444)_(1071739 10_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,150,444 | 107,173,910 | ||
| nssv15637174 | Submitted genomic | NC_000014.8:g.(?_1 07150444)_(1071739 10_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,150,444 | 107,173,910 | ||
| nssv15642114 | Submitted genomic | NC_000014.8:g.(?_1 07150444)_(1071739 10_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,150,444 | 107,173,910 | ||
| nssv15661626 | Submitted genomic | NC_000014.8:g.(?_1 07150444)_(1071739 10_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,150,444 | 107,173,910 | ||
| nssv15677297 | Submitted genomic | NC_000014.8:g.(?_1 07150444)_(1071739 10_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,150,444 | 107,173,910 | ||
| nssv15691393 | Submitted genomic | NC_000014.8:g.(?_1 07150444)_(1071739 10_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,150,444 | 107,173,910 | ||
| nssv15700894 | Submitted genomic | NC_000014.8:g.(?_1 07150444)_(1071739 10_?)dup | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,150,444 | 107,173,910 |