nsv4374549
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:43,418
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 392 SVs from 67 studies. See in: genome view
Overlapping variant regions from other studies: 392 SVs from 67 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4374549 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 26,361,377 | 26,404,794 |
| nsv4374549 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 26,402,868 | 26,446,285 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15627246 | copy number loss | 1-0479-007 | SNP array | Genotyping | 21 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15627246 | Remapped | Perfect | NC_000003.12:g.(?_ 26361377)_(2640479 4_?)del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 26,361,377 | 26,404,794 |
| nssv15627246 | Submitted genomic | NC_000003.11:g.(?_ 26402868)_(2644628 5_?)del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 26,402,868 | 26,446,285 |