nsv4374799
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:11
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,765,645
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 7309 SVs from 131 studies. See in: genome view
Overlapping variant regions from other studies: 4993 SVs from 123 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4374799 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 46,157,935 | 47,923,579 |
| nsv4374799 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 46,966,534 | 47,688,677 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15615298 | copy number gain | 1-0767-003 | SNP array | Genotyping | 20 |
| nssv15618150 | copy number gain | 1-0886-003 | SNP array | Genotyping | 19 |
| nssv15621697 | copy number gain | 1-1008-003 | SNP array | Genotyping | 25 |
| nssv15623593 | copy number gain | 1-0269-005 | SNP array | Genotyping | 22 |
| nssv15631775 | copy number gain | 10-0015-002 | SNP array | Genotyping | 17 |
| nssv15658017 | copy number gain | 3-0536-000 | SNP array | Genotyping | 12 |
| nssv15658295 | copy number gain | 4-0026-003 | SNP array | Genotyping | 22 |
| nssv15682746 | copy number gain | OCD1130-5299 | SNP array | Genotyping | 19 |
| nssv15683509 | copy number gain | OCD125-896992 | SNP array | Genotyping | 24 |
| nssv15692016 | copy number gain | OCD58-1015-3 | SNP array | Genotyping | 18 |
| nssv15700336 | copy number gain | 201550 | SNP array | Genotyping | 16 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15615298 | Remapped | Pass | NC_000010.11:g.(?_ 46157935)_(4792357 9_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 46,157,935 | 47,923,579 |
| nssv15618150 | Remapped | Pass | NC_000010.11:g.(?_ 46157935)_(4792357 9_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 46,157,935 | 47,923,579 |
| nssv15621697 | Remapped | Pass | NC_000010.11:g.(?_ 46157935)_(4792357 9_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 46,157,935 | 47,923,579 |
| nssv15623593 | Remapped | Pass | NC_000010.11:g.(?_ 46157935)_(4792357 9_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 46,157,935 | 47,923,579 |
| nssv15631775 | Remapped | Pass | NC_000010.11:g.(?_ 46157935)_(4792357 9_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 46,157,935 | 47,923,579 |
| nssv15658017 | Remapped | Pass | NC_000010.11:g.(?_ 46157935)_(4792357 9_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 46,157,935 | 47,923,579 |
| nssv15658295 | Remapped | Pass | NC_000010.11:g.(?_ 46157935)_(4792357 9_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 46,157,935 | 47,923,579 |
| nssv15682746 | Remapped | Pass | NC_000010.11:g.(?_ 46157935)_(4792357 9_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 46,157,935 | 47,923,579 |
| nssv15683509 | Remapped | Pass | NC_000010.11:g.(?_ 46157935)_(4792357 9_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 46,157,935 | 47,923,579 |
| nssv15692016 | Remapped | Pass | NC_000010.11:g.(?_ 46157935)_(4792357 9_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 46,157,935 | 47,923,579 |
| nssv15700336 | Remapped | Pass | NC_000010.11:g.(?_ 46157935)_(4792357 9_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 46,157,935 | 47,923,579 |
| nssv15615298 | Submitted genomic | NC_000010.10:g.(?_ 46966534)_(4768867 7_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,966,534 | 47,688,677 | ||
| nssv15618150 | Submitted genomic | NC_000010.10:g.(?_ 46966534)_(4768867 7_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,966,534 | 47,688,677 | ||
| nssv15621697 | Submitted genomic | NC_000010.10:g.(?_ 46966534)_(4768867 7_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,966,534 | 47,688,677 | ||
| nssv15623593 | Submitted genomic | NC_000010.10:g.(?_ 46966534)_(4768867 7_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,966,534 | 47,688,677 | ||
| nssv15631775 | Submitted genomic | NC_000010.10:g.(?_ 46966534)_(4768867 7_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,966,534 | 47,688,677 | ||
| nssv15658017 | Submitted genomic | NC_000010.10:g.(?_ 46966534)_(4768867 7_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,966,534 | 47,688,677 | ||
| nssv15658295 | Submitted genomic | NC_000010.10:g.(?_ 46966534)_(4768867 7_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,966,534 | 47,688,677 | ||
| nssv15682746 | Submitted genomic | NC_000010.10:g.(?_ 46966534)_(4768867 7_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,966,534 | 47,688,677 | ||
| nssv15683509 | Submitted genomic | NC_000010.10:g.(?_ 46966534)_(4768867 7_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,966,534 | 47,688,677 | ||
| nssv15692016 | Submitted genomic | NC_000010.10:g.(?_ 46966534)_(4768867 7_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,966,534 | 47,688,677 | ||
| nssv15700336 | Submitted genomic | NC_000010.10:g.(?_ 46966534)_(4768867 7_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,966,534 | 47,688,677 |