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dbVar

Database of genomic structural variation

nsv4374823

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:24,771

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 191 SVs from 46 studies. See in: genome view

Remapped(Score: Perfect):56,833,301-56,858,071

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4374823	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000020.11	Chr20	56,833,301	56,858,071
nsv4374823	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000020.10	Chr20	55,408,357	55,433,127

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15649692	copy number loss	2-1329-002	SNP array	Genotyping	14
nssv15653395	copy number loss	2-1731-003	SNP array	Genotyping	16

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15649692	Remapped	Perfect	NC_000020.11:g.(?_ 56833301)_(5685807 1_?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	56,833,301	56,858,071
nssv15653395	Remapped	Perfect	NC_000020.11:g.(?_ 56833301)_(5685807 1_?)del	GRCh38.p12	First Pass	NC_000020.11	Chr20	56,833,301	56,858,071
nssv15649692	Submitted genomic		NC_000020.10:g.(?_ 55408357)_(5543312 7_?)del	GRCh37 (hg19)		NC_000020.10	Chr20	55,408,357	55,433,127
nssv15653395	Submitted genomic		NC_000020.10:g.(?_ 55408357)_(5543312 7_?)del	GRCh37 (hg19)		NC_000020.10	Chr20	55,408,357	55,433,127

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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