nsv4375715
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:335,691
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1559 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 1559 SVs from 83 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4375715 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000018.10 | Chr18 | 72,955,358 | 73,291,048 |
| nsv4375715 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000018.9 | Chr18 | 70,622,593 | 70,958,283 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15631407 | copy number loss | 1-0092-005 | SNP array | Genotyping | 29 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15631407 | Remapped | Perfect | NC_000018.10:g.(?_ 72955358)_(7329104 8_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 72,955,358 | 73,291,048 |
| nssv15631407 | Submitted genomic | NC_000018.9:g.(?_7 0622593)_(70958283 _?)del | GRCh37 (hg19) | NC_000018.9 | Chr18 | 70,622,593 | 70,958,283 |