Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv4375809

Organism: Homo sapiens

Study:nstd173 (Zarrei et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:165,870

Publication(s):Zarrei et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1722 SVs from 92 studies. See in: genome view

Remapped(Score: Good):22,324,698-22,490,567

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4375809	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	22,324,698	22,490,567
nsv4375809	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000014.8	Chr14	22,793,130	22,959,555

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv15629062	copy number gain	1-0548-002	SNP array	Genotyping	22
nssv15640099	copy number gain	14-0112-003	SNP array	Genotyping	21
nssv15667147	copy number gain	7-0122-003	SNP array	Genotyping	17

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15629062	Remapped	Good	NC_000014.9:g.(?_2 2324698)_(22490567 _?)dup	GRCh38.p12	First Pass	NC_000014.9	Chr14	22,324,698	22,490,567
nssv15640099	Remapped	Good	NC_000014.9:g.(?_2 2324698)_(22490567 _?)dup	GRCh38.p12	First Pass	NC_000014.9	Chr14	22,324,698	22,490,567
nssv15667147	Remapped	Good	NC_000014.9:g.(?_2 2324698)_(22490567 _?)dup	GRCh38.p12	First Pass	NC_000014.9	Chr14	22,324,698	22,490,567
nssv15629062	Submitted genomic		NC_000014.8:g.(?_2 2793130)_(22959555 _?)dup	GRCh37 (hg19)		NC_000014.8	Chr14	22,793,130	22,959,555
nssv15640099	Submitted genomic		NC_000014.8:g.(?_2 2793130)_(22959555 _?)dup	GRCh37 (hg19)		NC_000014.8	Chr14	22,793,130	22,959,555
nssv15667147	Submitted genomic		NC_000014.8:g.(?_2 2793130)_(22959555 _?)dup	GRCh37 (hg19)		NC_000014.8	Chr14	22,793,130	22,959,555

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI